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Carg23111 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23111
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:871275..871835
RNA-Seq ExpressionCarg23111
SyntenyCarg23111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581370.1 hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2372.09Show/hide
Query:  ISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR
        I+T+ TP  VQ+V K+TSDRLLQKF DATEFGFDY+ SGLWSPPLQR+VYLS+SG VFN  DL RKLE+VLSS R R E   FKFR
Subjt:  ISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR

KAG6594533.1 hypothetical protein SDJN03_11086, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4096.7Show/hide
Query:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKAL
        MSISTTATPKLVQRVPKSTSDRLLQKFCDATEF FDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR  L
Subjt:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKAL

KAG7026513.1 hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-52100Show/hide
Query:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIW
        MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIW
Subjt:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIW

Query:  SIEKYG
        SIEKYG
Subjt:  SIEKYG

KAG7034657.1 hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2470.79Show/hide
Query:  ISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKAL
        I+T+ TP  VQ+V K+TSDRLLQKF DATEFGFDY+ SGLWSPPLQR+VYLS+SG VFN  DL RKLE+VLSS R R E   FKFR +L
Subjt:  ISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKAL

XP_038892892.1 uncharacterized protein LOC120081796 [Benincasa hispida]4.5e-2575Show/hide
Query:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR
        ++ S   TPK VQRV KSTSDRLLQKF DATEFGFDY+TSGLWSPPLQR+VYLSSSG+VFN TDL  KL+ VL+S R RR  SCFKFR
Subjt:  MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ8 Uncharacterized protein1.6e-2375.61Show/hide
Query:  ATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR
        + PK VQRV KSTSDRLLQKF DATEFGFDY+ SGLWSPPLQRTVYL+SSG+V N TDL  KL+ VL+S RSR   SCFKFR
Subjt:  ATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR

A0A251PGQ3 Uncharacterized protein3.1e-1655.56Show/hide
Query:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR
        T  +VQ VPKSTSDRLLQKF DA EF FDY+ SGLWSPP++RTV+LSS GR+F   ++  KL  +  +  S  +  C  FR
Subjt:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFR

A0A314YAR0 Uncharacterized protein1.8e-1655Show/hide
Query:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKF
        T  +VQ VPKSTSDRLLQKF DA EF FDY+ SGLWSPP++RTV+LSS GR+F   ++  KL  ++ +  S+ +  C  F
Subjt:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKF

A0A314ZRE6 Uncharacterized protein1.8e-1655Show/hide
Query:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKF
        T  +VQ VPKSTSDRLLQKF DA EF FDY+ SGLWSPP++RTV+LSS GR+F   ++  KL  ++ +  S+ +  C  F
Subjt:  TPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKF

A0A6J5UK00 Uncharacterized protein3.1e-1649.47Show/hide
Query:  LVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIWSIEKY
        +VQ VPKSTSDRLLQKF DA EF FDY+ SGLWSPP++RTV+LSS GR+F   ++  KL  ++ +  S  +  C    K  L   +    S  KY
Subjt:  LVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIWSIEKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTTCCACCACTGCTACTCCAAAATTAGTTCAGAGGGTACCCAAATCCACTTCAGACAGATTGCTTCAGAAGTTCTGCGATGCTACAGAATTTGGATTTGATTA
CGACACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCACTGTTTATTTGAGCTCTTCCGGTAGAGTTTTCAATCCAACGGATTTGCAAAGAAAGCTTGAGAATGTGTTGA
GTTCTGATCGTAGTAGAAGAGAAACAAGTTGTTTCAAATTCAGAAAGGCTTTGCTTTACAAAACTAAGCACAGTATTTGGAGTATTGAAAAATATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTTCCACCACTGCTACTCCAAAATTAGTTCAGAGGGTACCCAAATCCACTTCAGACAGATTGCTTCAGAAGTTCTGCGATGCTACAGAATTTGGATTTGATTA
CGACACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCACTGTTTATTTGAGCTCTTCCGGTAGAGTTTTCAATCCAACGGATTTGCAAAGAAAGCTTGAGAATGTGTTGA
GTTCTGATCGTAGTAGAAGAGAAACAAGTTGTTTCAAATTCAGAAAGGCTTTGCTTTACAAAACTAAGCACAGTATTTGGAGTATTGAAAAATATGGATAG
Protein sequenceShow/hide protein sequence
MSISTTATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQRKLENVLSSDRSRRETSCFKFRKALLYKTKHSIWSIEKYG