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Carg23113 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23113
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription regulators
Genome locationCarg_Chr07:876205..876981
RNA-Seq ExpressionCarg23113
SyntenyCarg23113
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594536.1 hypothetical protein SDJN03_11089, partial [Cucurbita argyrosperma subsp. sororia]1.5e-68100Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

KAG7026515.1 hypothetical protein SDJN02_10517 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-68100Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

XP_022926627.1 uncharacterized protein LOC111433703 [Cucurbita moschata]8.4e-6797.22Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVS LENRFNSRKKLRLVRSLGTHESPGKQRSGFWN+V+FIHKLKLKLEAIEREYLKSIKELHALK+VKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

XP_023003437.1 uncharacterized protein LOC111497051 [Cucurbita maxima]4.6e-6596.53Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGF NAVVFIHKLKLKLEAIEREYLKSIKELHALK+VKVEKMGEEIKVKVRCEKG+NRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        R+NVVEARVSCS CFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

XP_023518564.1 uncharacterized protein LOC111782031 [Cucurbita pepo subsp. pepo]9.9e-6898.61Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVSTL+NRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALK+VKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

TrEMBL top hitse value%identityAlignment
A0A0A0KHW9 Uncharacterized protein2.3e-4672.08Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL
        MVSTL+ RF+SR KLRLVRSL T+ES G+QR  FWNAV+FIHKLKLKLEAIE          REYL SIK+ H+ K+VKVEK GEE +VKVRCEKG +RL
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL

Query:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAED-DQLVNVKDITEAINVAID
        VSVLEA E+M LNVVEARVSC+ECF MEA AVAED  QL+N+ DITEAINVAID
Subjt:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAED-DQLVNVKDITEAINVAID

A0A6J1ED01 uncharacterized protein LOC1114332049.4e-4869.28Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL
        MVST + RF+SRKKLRLVRSL T++S GKQ S FWNAV+F+HKLKLKLEAIE          REYL S+K++HA K+VKVEK+GEE++VKVRCEKG +RL
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL

Query:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAID
        V+VLEA ++M LNV++A+VSCSECFSMEAIAVAED+Q +N+ DITEAIN AID
Subjt:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAID

A0A6J1EEW8 uncharacterized protein LOC1114337034.1e-6797.22Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVS LENRFNSRKKLRLVRSLGTHESPGKQRSGFWN+V+FIHKLKLKLEAIEREYLKSIKELHALK+VKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

A0A6J1IR65 uncharacterized protein LOC1114786313.6e-4769.28Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL
        MVST + RF+SRKKLRLVRSL T++S GKQ S FWNAV+F+HKLKLKLEAIE          REYL S+K++HA K+VKVEK+GEE +VKVRCEKG +RL
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIE----------REYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRL

Query:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAID
        V+VLEA ++M LNV++A+VSCSECFSMEAIAVAED+Q +N+ DITEAIN AID
Subjt:  VSVLEALERMRLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAID

A0A6J1KMI6 uncharacterized protein LOC1114970512.2e-6596.53Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM
        MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGF NAVVFIHKLKLKLEAIEREYLKSIKELHALK+VKVEKMGEEIKVKVRCEKG+NRLVSVLEALERM
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERM

Query:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA
        R+NVVEARVSCS CFSMEAIAVAEDDQLVNVKDITEAINVAIDA
Subjt:  RLNVVEARVSCSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein5.9e-1840.94Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTH--ESPGKQRSGFWNAVVFIHKLKLKLEAIEREY--LKSIKE--LHALKDVKVEKMGEEIKVKVRCEKGENRLVSVL
        MV++ + +  S+ K   +++L TH   S  +Q      A+++I  LKL++EA++REY  LK  K+  LH  ++VKVEK+GE  +VK++  +GEN LV++L
Subjt:  MVSTLENRFNSRKKLRLVRSLGTH--ESPGKQRSGFWNAVVFIHKLKLKLEAIEREY--LKSIKE--LHALKDVKVEKMGEEIKVKVRCEKGENRLVSVL

Query:  EALERMRLNVVEARVSCSECFSMEAIAVAED-DQLVNVKDITEAINVAI
        EA E M LNV +AR SC + F+MEAI   +  D+L +V D+T+ +  A+
Subjt:  EALERMRLNVVEARVSCSECFSMEAIAVAED-DQLVNVKDITEAINVAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)1.8e-0632.43Show/hide
Query:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIER----EYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGE-NRLVSVLE
        MVS  + R + ++K +L+RS+ T+       S   +A  +I KLK K+E   +    E   S         V VE + +   + V   K +   LVSVLE
Subjt:  MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIER----EYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGE-NRLVSVLE

Query:  ALERMRLNVVEARVSCSECFSMEAIAVA-EDDQLVNVKDITEAINVAI
        A E + LNV+EAR SC++ FS+ A+ +  ED + ++ + + +A+  AI
Subjt:  ALERMRLNVVEARVSCSECFSMEAIAVA-EDDQLVNVKDITEAINVAI

AT3G56220.1 transcription regulators1.8e-0634.67Show/hide
Query:  MVSTLENRFNS-RKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKD----VKVEKMGEEIKVKVRCEKGE-NRLVSVL
        MVS    R +S R+K  L+RS+ T      + S   +A  +I KLK K+E I      S +      D    V VE + +   +KV   K E   LV VL
Subjt:  MVSTLENRFNS-RKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKD----VKVEKMGEEIKVKVRCEKGE-NRLVSVL

Query:  EALERMRLNVVEARVSCSECFSMEAIAVA--EDDQLVNVKDITEAINVAI
        E  E + L+VVEARVSC++ FS+ AI  +  +D   ++ + + +A+  AI
Subjt:  EALERMRLNVVEARVSCSECFSMEAIAVA--EDDQLVNVKDITEAINVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTACATTAGAAAACAGATTCAACTCACGCAAGAAGCTACGCCTTGTTCGATCTCTGGGCACCCATGAATCCCCTGGAAAACAGAGGAGTGGGTTCTGGAACGC
TGTTGTGTTCATTCATAAGCTTAAGCTGAAGCTGGAAGCAATTGAGAGAGAATACTTGAAGTCTATAAAGGAACTCCATGCGCTCAAGGACGTGAAGGTGGAGAAGATGG
GAGAAGAGATTAAAGTGAAAGTGAGATGCGAGAAGGGAGAGAATAGATTGGTTTCAGTATTAGAAGCATTGGAGAGAATGAGATTGAACGTGGTGGAAGCCAGAGTTTCG
TGTAGTGAATGCTTTTCAATGGAGGCCATTGCTGTAGCTGAAGATGATCAGTTGGTGAATGTAAAAGATATAACTGAAGCTATCAATGTAGCCATTGATGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTCAGGCCACATTCTTCACTAACTTATCTCAATTGGGAAGCAAGTCGAAGCTGAGAGAGATGGTTTCTACATTAGAAAACAGATTCAACTCACGCAAGAAGCTACGCC
TTGTTCGATCTCTGGGCACCCATGAATCCCCTGGAAAACAGAGGAGTGGGTTCTGGAACGCTGTTGTGTTCATTCATAAGCTTAAGCTGAAGCTGGAAGCAATTGAGAGA
GAATACTTGAAGTCTATAAAGGAACTCCATGCGCTCAAGGACGTGAAGGTGGAGAAGATGGGAGAAGAGATTAAAGTGAAAGTGAGATGCGAGAAGGGAGAGAATAGATT
GGTTTCAGTATTAGAAGCATTGGAGAGAATGAGATTGAACGTGGTGGAAGCCAGAGTTTCGTGTAGTGAATGCTTTTCAATGGAGGCCATTGCTGTAGCTGAAGATGATC
AGTTGGTGAATGTAAAAGATATAACTGAAGCTATCAATGTAGCCATTGATGCCTAATTATAAGCTTCACCTCCTTACCCACCACTTGAATCACAATGTTTCTTGGTATCT
CAACCTCTCTTTTTTTTCTTAATTAGATCCTAAATTATTATATAAAATATTTACTTTTTGTTTTGATAGTAAAAAG
Protein sequenceShow/hide protein sequence
MVSTLENRFNSRKKLRLVRSLGTHESPGKQRSGFWNAVVFIHKLKLKLEAIEREYLKSIKELHALKDVKVEKMGEEIKVKVRCEKGENRLVSVLEALERMRLNVVEARVS
CSECFSMEAIAVAEDDQLVNVKDITEAINVAIDA