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Carg23136 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23136
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCheckpoint protein
Genome locationCarg_Chr08:3285146..3286181
RNA-Seq ExpressionCarg23136
SyntenyCarg23136
Gene Ontology termsGO:0000077 - DNA damage checkpoint (biological process)
GO:0006259 - DNA metabolic process (biological process)
GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domainsIPR007150 - Checkpoint protein Hus1/Mec3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593387.1 hypothetical protein SDJN03_12863, partial [Cucurbita argyrosperma subsp. sororia]6.4e-67100Show/hide
Query:  DQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLIKQSVYIADFPF
        DQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLIKQSVYIADFPF
Subjt:  DQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLIKQSVYIADFPF

Query:  LTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI
        LTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI
Subjt:  LTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI

KAG7025734.1 hypothetical protein SDJN02_12232, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-133100Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQIIDQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLI
        NGPAANRLQIIDQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLI
Subjt:  NGPAANRLQIIDQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLI

Query:  KQSVYIADFPFLTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI
        KQSVYIADFPFLTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI
Subjt:  KQSVYIADFPFLTLEHVEFRWPSHAAYDFKSKCQMEFGRSVLVI

XP_022145400.1 uncharacterized protein LOC111014854 [Momordica charantia]6.6e-5654.34Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKA+LTD  VNLLEKRFL ALDKM KIC+LYLTRDYVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FT+DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQISTTLIT  AEYRKLFVIGE  NAPA+D+NLSAQTRST    ++I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

XP_022953965.1 uncharacterized protein LOC111456364 [Cucurbita moschata]7.8e-5755.47Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKAYLTD  VNLLEKRFL ALDKM KIC+LYLTR+YVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FTVDISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQISTTLIT  AEYRKLFVIGE  NAPA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

XP_023549190.1 uncharacterized protein LOC111807621 [Cucurbita pepo subsp. pepo]1.0e-5655.09Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKAYLTD  VNLLEKRFL ALDKM KIC+LYLTR+YVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FT+DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQISTTLIT  AEYRKLFVIGE  NAPA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

TrEMBL top hitse value%identityAlignment
A0A1S3CDJ5 Checkpoint protein1.6e-5554.34Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKA+LTD  VNLLEKRFL ALDKM KIC+LYLTRDYVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FT+DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQIST LIT  AEYRKLFVIGE  +APA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

A0A5A7UU85 Checkpoint protein1.6e-5554.34Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKA+LTD  VNLLEKRFL ALDKM KIC+LYLTRDYVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FT+DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQIST LIT  AEYRKLFVIGE  +APA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

A0A6J1CUD3 Checkpoint protein3.2e-5654.34Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKA+LTD  VNLLEKRFL ALDKM KIC+LYLTRDYVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FT+DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQISTTLIT  AEYRKLFVIGE  NAPA+D+NLSAQTRST    ++I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

A0A6J1GR46 Checkpoint protein3.8e-5755.47Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKAYLTD  VNLLEKRFL ALDKM KIC+LYLTR+YVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI FTVDISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQISTTLIT  AEYRKLFVIGE  NAPA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

A0A6J1JQL2 Checkpoint protein9.3e-5654.34Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKAYLTD  VNLLEKRFL ALDKM KIC+LYLTR+YVIFLHNLL+G GIQS AQF KE+LFDD+RISS+ND+RI F +DISLLH AVRSSVSICSEFG
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
        NGP ANRLQI                                         Q +EL+TALDMAQD P+ L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQI TTLIT  AEYRKLFVIGE  NAPA+DQNLSAQTRST    R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52530.1 CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).2.6e-4242.26Show/hide
Query:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG
        MKFKA+LT+  VNLLEKRFL A DKM K C+L LT++++ FLHNLL+G G+Q  AQF K+ LFDD+RISS+N++RI F++D++LL+ AV+SSVSIC+EF 
Subjt:  MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFG

Query:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------
         G A+NRLQI                                         Q IEL+TALD AQD P  L                              
Subjt:  NGPAANRLQI---------------------------------------IDQAIELRTALDMAQDSPRKL------------------------------

Query:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH
            VQ+STTLI    E+++L VIGE + AP +D+NLSAQ RS     R+I  G      +SV H
Subjt:  ----VQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTAAGGCATATCTTACGGATTATGTGGTAAATCTCCTGGAGAAGAGGTTTCTACTAGCCCTAGACAAGATGTGCAAGATATGCAATCTCTATTTGACCAGAGA
TTATGTCATCTTCTTGCATAACCTCCTTAGTGGCGGTGGAATTCAATCAACTGCTCAGTTTTGTAAAGAATCTCTGTTTGATGACCACAGAATCTCCAGCAAGAATGATG
AGCGAATTGTGTTTACCGTAGACATTTCTCTTCTCCACTGTGCCGTTCGTAGTAGTGTTAGCATTTGTTCTGAGTTTGGTAATGGTCCAGCAGCAAATCGCCTTCAAATT
ATAGATCAAGCTATTGAACTTCGGACTGCTCTAGATATGGCACAGGATTCGCCTCGGAAGCTTGTGCAGATTTCCACAACATTGATCACTCCTTGTGCTGAGTATCGGAA
ACTATTCGTCATAGGGGAACTAACAAATGCTCCAGCTAAAGATCAAAATCTAAGTGCTCAGACTAGATCGACCATTGCGGAGAGACGTTCAATCTGTACAGGGCGCCTGC
TTGACAGTATTATTTCAGTTCTTCATTCCTGGATCTCTGACAGACTGATAAAGCAATCAGTCTACATTGCCGACTTCCCTTTCTTGACCCTGGAGCATGTTGAATTTAGA
TGGCCTTCTCATGCAGCCTATGATTTCAAGAGCAAATGTCAAATGGAATTTGGCCGAAGTGTACTGGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTAAGGCATATCTTACGGATTATGTGGTAAATCTCCTGGAGAAGAGGTTTCTACTAGCCCTAGACAAGATGTGCAAGATATGCAATCTCTATTTGACCAGAGA
TTATGTCATCTTCTTGCATAACCTCCTTAGTGGCGGTGGAATTCAATCAACTGCTCAGTTTTGTAAAGAATCTCTGTTTGATGACCACAGAATCTCCAGCAAGAATGATG
AGCGAATTGTGTTTACCGTAGACATTTCTCTTCTCCACTGTGCCGTTCGTAGTAGTGTTAGCATTTGTTCTGAGTTTGGTAATGGTCCAGCAGCAAATCGCCTTCAAATT
ATAGATCAAGCTATTGAACTTCGGACTGCTCTAGATATGGCACAGGATTCGCCTCGGAAGCTTGTGCAGATTTCCACAACATTGATCACTCCTTGTGCTGAGTATCGGAA
ACTATTCGTCATAGGGGAACTAACAAATGCTCCAGCTAAAGATCAAAATCTAAGTGCTCAGACTAGATCGACCATTGCGGAGAGACGTTCAATCTGTACAGGGCGCCTGC
TTGACAGTATTATTTCAGTTCTTCATTCCTGGATCTCTGACAGACTGATAAAGCAATCAGTCTACATTGCCGACTTCCCTTTCTTGACCCTGGAGCATGTTGAATTTAGA
TGGCCTTCTCATGCAGCCTATGATTTCAAGAGCAAATGTCAAATGGAATTTGGCCGAAGTGTACTGGTCATTTGA
Protein sequenceShow/hide protein sequence
MKFKAYLTDYVVNLLEKRFLLALDKMCKICNLYLTRDYVIFLHNLLSGGGIQSTAQFCKESLFDDHRISSKNDERIVFTVDISLLHCAVRSSVSICSEFGNGPAANRLQI
IDQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELTNAPAKDQNLSAQTRSTIAERRSICTGRLLDSIISVLHSWISDRLIKQSVYIADFPFLTLEHVEFR
WPSHAAYDFKSKCQMEFGRSVLVI