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Carg23141 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23141
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSodium channel protein type 10 subunit alpha like
Genome locationCarg_Chr08:3315025..3317202
RNA-Seq ExpressionCarg23141
SyntenyCarg23141
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]5.8e-67100Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

XP_022145821.1 uncharacterized protein LOC111015178 [Momordica charantia]2.4e-4478.15Show/hide
Query:  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF

Query:  WTSALDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSALDGKNRPNKGSRFRR

XP_022959617.1 uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]1.4e-6599.24Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNP AKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

XP_023004358.1 uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]7.1e-6597.71Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

XP_023513765.1 uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]5.5e-6597.71Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVC AAVRPPPDSDPPPDEDPIRLKGF AIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

TrEMBL top hitse value%identityAlignment
A0A0A0K8T0 Uncharacterized protein4.3e-3971.77Show/hide
Query:  SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRR-SSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFW
        S +L+  S++V A +IA+PL S+FH   EI FS LH RR S L  SSN  A+S VC+AAVRPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFW
Subjt:  SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRR-SSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFW

Query:  MSLFFWTSALDGKNRPNKGSRFRR
        MSLFFWTSALDG+NRPNKGSRFRR
Subjt:  MSLFFWTSALDGKNRPNKGSRFRR

A0A1S3CE06 uncharacterized protein LOC1034997983.9e-4071.54Show/hide
Query:  SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWM
        S +L+  S +V A +IA+PL S+FH   +I FSP   R S L  SSN  AKS VC+AAVRPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWM
Subjt:  SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWM

Query:  SLFFWTSALDGKNRPNKGSRFRR
        SLFFWTSALDGKNRPNKGSRFRR
Subjt:  SLFFWTSALDGKNRPNKGSRFRR

A0A6J1CXJ1 uncharacterized protein LOC1110151781.2e-4478.15Show/hide
Query:  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF

Query:  WTSALDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSALDGKNRPNKGSRFRR

A0A6J1H516 uncharacterized protein LOC111460643 isoform X17.0e-6699.24Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNP AKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X13.5e-6597.71Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52550.1 unknown protein3.7e-1135.34Show/hide
Query:  APSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFF
        A + S+SN   H  R    P  +   FS F +      SPL  +   L+ +  P  + AV       PP  DPPP ++   L     + S   DRV+IF 
Subjt:  APSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFF

Query:  AVLFWMSLFFWTSALDGK-----NRPNKGSRFR
        +VL W+SLFFW SAL G+      +  KGSRF+
Subjt:  AVLFWMSLFFWTSALDGK-----NRPNKGSRFR

AT3G15780.1 unknown protein6.1e-1437.12Show/hide
Query:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA  + +TS  LYH S           + S F  P  +      HRR+++LL+S    +          PP  DPPP ED  +L+G     ++  DRV+I
Subjt:  MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALD--GKNRPNKGSRFR
        F AV FWM LFFW +  D  GK +  KGSRF+
Subjt:  FFAVLFWMSLFFWTSALD--GKNRPNKGSRFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGA
AATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCG
ATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTC
TTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGA
AATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCG
ATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTC
TTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATA
TAAATAGTGTTAAGCTGCTTGATTTTAACTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAAGTAAACTGTCA
TGGAAAGCCCTATTCTGTATCATATTCTTATCAAGTGTCTTAAAAATTTCCTGAATCCTTCTCTAATTATTAACCTTTTTTTCTTTTTTGAACCTTTTCTTGATTTGTGC
Protein sequenceShow/hide protein sequence
MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSL
FFWTSALDGKNRPNKGSRFRR