; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23142 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23142
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr08:3318312..3318992
RNA-Seq ExpressionCarg23142
SyntenyCarg23142
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]1.4e-2255.91Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS   G+  G   K + +   + E +KMVIGSRPPGC NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]2.2e-2357.48Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS  G  E G  E  E ++     ++KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKCRCGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6498.4Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP
        MSLPSSFKLPLLL  FFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP

Query:  SSGVEDDSYYLLSWKCRCGNKIYQP
        SSGVEDDSYYLLSWKCRCGNKIYQP
Subjt:  SSGVEDDSYYLLSWKCRCGNKIYQP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-66100Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP
        MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVP

Query:  SSGVEDDSYYLLSWKCRCGNKIYQP
        SSGVEDDSYYLLSWKCRCGNKIYQP
Subjt:  SSGVEDDSYYLLSWKCRCGNKIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]1.9e-2255.91Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS   G+  G  +  E +     E +KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein1.1e-2357.48Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS  G  E G  E  E ++     ++KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKCRCGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein9.1e-2355.91Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS   G+  G  +  E +     E +KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein7.0e-2355.91Show/hide
Query:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--
        +SL +S KL L L  FF F      P+  GL   RS   G+  G   K + +   + E +KMVIGSRPPGC NKC +CRPCMAAAVVP HR K  KAF  
Subjt:  MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--

Query:  VPSSGVEDDSYYLLSWKCRCGNKIYQP
          SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  VPSSGVEDDSYYLLSWKCRCGNKIYQP

K7KZD9 Epidermal patterning factor-like protein3.5e-2253.39Show/hide
Query:  KLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDD
        KLP+ +    F FFL+FLPSKSG             G++    RE     EQ+KMVIGS+PP C NKCKSCRPCMA  VVP H+K+  K F  SS  +DD
Subjt:  KLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDD

Query:  SYYLLSWKCRCGNKIYQP
        +YYLLSWKC+CG+K++QP
Subjt:  SYYLLSWKCRCGNKIYQP

K7L7X4 Epidermal patterning factor-like protein1.7e-2153.39Show/hide
Query:  KLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDD
        KLP+ +    F FFL+FLPSKS        GG     +  +G  ES       KMVIGS+PP C NKCKSCRPCMA  VVP H+K+  K F  SS  +DD
Subjt:  KLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDD

Query:  SYYLLSWKCRCGNKIYQP
        +YYLLSWKC+CGNK++QP
Subjt:  SYYLLSWKCRCGNKIYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase9.7e-0634.12Show/hide
Query:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDSYYLLSWKCRCGNKIYQP
        K  G  +KG R         ++++GSRPP C NKC  C PC A  V+  HR            +    YY   W C    KIY P
Subjt:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDSYYLLSWKCRCGNKIYQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 83.7e-0534.29Show/hide
Query:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSGVEDDS--YYLLSWKCRCGNKIYQP
        K+ V+GS PP C  KC++C+PC+     +  AH              +DDS  YY + W CRC +++++P
Subjt:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSGVEDDS--YYLLSWKCRCGNKIYQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 19.7e-0631.25Show/hide
Query:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSG-------------VEDDSYYLLSWKCRCGNKIYQP
        + K  +GS PP C N+C +C PCMA  V     +  F    P SG              +  +Y  + WKC C    Y P
Subjt:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSG-------------VEDDSYYLLSWKCRCGNKIYQP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 59.7e-0629.06Show/hide
Query:  LPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDS
        LP L+ + F  FF +   S +      SGG G+    + +      +VD+++    GS PP C  KC  C PC A  V            +    +    
Subjt:  LPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDS

Query:  YYLLSWKCRCGNKIYQP
        YY  +W+C+CGNK++ P
Subjt:  YYLLSWKCRCGNKIYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 23.3e-0630.25Show/hide
Query:  FLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSS-------------GVED
        FL  L   +   +     G  E  ++E  +     V    + +IGSRPP CE  +C+SC  C A  V    + K       SS             G + 
Subjt:  FLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSS-------------GVED

Query:  DSYYLLSWKCRCGNKIYQP
         +Y  +SWKC+CGN IY P
Subjt:  DSYYLLSWKCRCGNKIYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein2.6e-0634.29Show/hide
Query:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSGVEDDS--YYLLSWKCRCGNKIYQP
        K+ V+GS PP C  KC++C+PC+     +  AH              +DDS  YY + W CRC +++++P
Subjt:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSGVEDDS--YYLLSWKCRCGNKIYQP

AT2G30370.1 allergen-related5.3e-0738.71Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      P H        VP        YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDSYYLLSWKCRCGNKIYQP

AT3G22820.1 allergen-related6.9e-0729.06Show/hide
Query:  LPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDS
        LP L+ + F  FF +   S +      SGG G+    + +      +VD+++    GS PP C  KC  C PC A  V            +    +    
Subjt:  LPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDS

Query:  YYLLSWKCRCGNKIYQP
        YY  +W+C+CGNK++ P
Subjt:  YYLLSWKCRCGNKIYQP

AT4G37810.1 unknown protein2.4e-0730.25Show/hide
Query:  FLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSS-------------GVED
        FL  L   +   +     G  E  ++E  +     V    + +IGSRPP CE  +C+SC  C A  V    + K       SS             G + 
Subjt:  FLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSS-------------GVED

Query:  DSYYLLSWKCRCGNKIYQP
         +Y  +SWKC+CGN IY P
Subjt:  DSYYLLSWKCRCGNKIYQP

AT5G10310.1 unknown protein6.9e-0731.25Show/hide
Query:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSG-------------VEDDSYYLLSWKCRCGNKIYQP
        + K  +GS PP C N+C +C PCMA  V     +  F    P SG              +  +Y  + WKC C    Y P
Subjt:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSG-------------VEDDSYYLLSWKCRCGNKIYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTTCCTTCTTCCTTCAAATTGCCTCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACATTTCTTCCTTCTAAATCAGGGTTGTTTTGGCCGAGGAGCGG
CGGAGGGGGAAAAGAAACGGGGAATTTGGAGAAGGGTGAAAGAGAGAGTTATGTGGTGGATGAACAAAAGAAAATGGTGATTGGTTCCAGGCCGCCGGGGTGTGAGAACA
AGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGGTGGTGCCGGCGCATAGAAAGAAATGGTTCAAAGCATTTGTTCCGTCGTCTGGAGTTGAAGATGATAGCTACTAT
CTTCTCTCGTGGAAATGCCGATGTGGGAATAAGATCTATCAGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTTCCTTCTTCCTTCAAATTGCCTCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACATTTCTTCCTTCTAAATCAGGGTTGTTTTGGCCGAGGAGCGG
CGGAGGGGGAAAAGAAACGGGGAATTTGGAGAAGGGTGAAAGAGAGAGTTATGTGGTGGATGAACAAAAGAAAATGGTGATTGGTTCCAGGCCGCCGGGGTGTGAGAACA
AGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGGTGGTGCCGGCGCATAGAAAGAAATGGTTCAAAGCATTTGTTCCGTCGTCTGGAGTTGAAGATGATAGCTACTAT
CTTCTCTCGTGGAAATGCCGATGTGGGAATAAGATCTATCAGCCCTAG
Protein sequenceShow/hide protein sequence
MSLPSSFKLPLLLFFFFFFFFLTFLPSKSGLFWPRSGGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSGVEDDSYY
LLSWKCRCGNKIYQP