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Carg23156 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23156
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:3392208..3393713
RNA-Seq ExpressionCarg23156
SyntenyCarg23156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593406.1 hypothetical protein SDJN03_12882, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2897.14Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVA
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL++
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVA

KAG7025754.1 hypothetical protein SDJN02_12252, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-48100Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVAGLFGVVMEPAWPIEQLCSYTLATAAKASGI
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVAGLFGVVMEPAWPIEQLCSYTLATAAKASGI
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVAGLFGVVMEPAWPIEQLCSYTLATAAKASGI

Query:  Y
        Y
Subjt:  Y

XP_022959820.1 uncharacterized protein LOC111460770 isoform X1 [Cucurbita moschata]5.0e-3448.77Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSA+GTAVCSVINCGQGACKAS+ASFLGFDMRAVL                                
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------

Query:  ----------------------------------------------------------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKAS
                                                                              VAGLFGVVMEPAWPIEQLCSYTLATAAKAS
Subjt:  ----------------------------------------------------------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKAS

Query:  GIY
        GIY
Subjt:  GIY

XP_022959821.1 uncharacterized protein LOC111460770 isoform X2 [Cucurbita moschata]1.0e-3964.29Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSA+GTAVCSVINCGQGACKAS+ASFLGFDMRAVL                                
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------

Query:  ---------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY
                             VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY
Subjt:  ---------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY

XP_038899645.1 uncharacterized protein LOC120086904 [Benincasa hispida]1.2e-1474.6Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD
        MEEG +LCILI ISFQF L TSGILN S      +++GTAVCSVINCGQG CKASNASFLGFD
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD

TrEMBL top hitse value%identityAlignment
A0A6J1CVF7 uncharacterized protein LOC111014937 isoform X16.9e-1371.43Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD
        ME+ FN  ILI IS QF L TS  LN S ELVS S++G  VCSVINCGQG CKASNASFLGFD
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD

A0A6J1CW51 uncharacterized protein LOC111014937 isoform X26.9e-1371.43Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD
        ME+ FN  ILI IS QF L TS  LN S ELVS S++G  VCSVINCGQG CKASNASFLGFD
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFD

A0A6J1H5X8 uncharacterized protein LOC111460770 isoform X25.1e-4064.29Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSA+GTAVCSVINCGQGACKAS+ASFLGFDMRAVL                                
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------

Query:  ---------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY
                             VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY
Subjt:  ---------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY

A0A6J1H7F3 uncharacterized protein LOC111460770 isoform X12.4e-3448.77Show/hide
Query:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------
        MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSA+GTAVCSVINCGQGACKAS+ASFLGFDMRAVL                                
Subjt:  MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVL--------------------------------

Query:  ----------------------------------------------------------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKAS
                                                                              VAGLFGVVMEPAWPIEQLCSYTLATAAKAS
Subjt:  ----------------------------------------------------------------------VAGLFGVVMEPAWPIEQLCSYTLATAAKAS

Query:  GIY
        GIY
Subjt:  GIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGGGTTCAATCTCTGCATCCTCATCTCCATTTCTTTTCAATTCCTTCTTCCAACCAGTGGAATTCTGAACAAGTCAAATGAGCTGGTTTCATACTCAGCCCG
AGGTACCGCTGTGTGCTCAGTCATAAATTGTGGGCAAGGAGCTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATATGCGTGCAGTTCTGGTTGCCGGGTTGTTTG
GTGTGGTAATGGAACCTGCGTGGCCGATTGAGCAGCTTTGTTCCTACACACTTGCCACTGCGGCGAAGGCTTCGGGAATCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGGGTTCAATCTCTGCATCCTCATCTCCATTTCTTTTCAATTCCTTCTTCCAACCAGTGGAATTCTGAACAAGTCAAATGAGCTGGTTTCATACTCAGCCCG
AGGTACCGCTGTGTGCTCAGTCATAAATTGTGGGCAAGGAGCTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATATGCGTGCAGTTCTGGTTGCCGGGTTGTTTG
GTGTGGTAATGGAACCTGCGTGGCCGATTGAGCAGCTTTGTTCCTACACACTTGCCACTGCGGCGAAGGCTTCGGGAATCTATTGA
Protein sequenceShow/hide protein sequence
MEEGFNLCILISISFQFLLPTSGILNKSNELVSYSARGTAVCSVINCGQGACKASNASFLGFDMRAVLVAGLFGVVMEPAWPIEQLCSYTLATAAKASGIY