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Carg23196 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23196
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:7964725..7967327
RNA-Seq ExpressionCarg23196
SyntenyCarg23196
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016882.1 hypothetical protein SDJN02_21993 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-78100Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQTCIEEETHLLQFWAQLMEDAIHRIQPQRHESTLCWSPKVIFPPSDFELK
        MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQTCIEEETHLLQFWAQLMEDAIHRIQPQRHESTLCWSPKVIFPPSDFELK
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQTCIEEETHLLQFWAQLMEDAIHRIQPQRHESTLCWSPKVIFPPSDFELK

Query:  ALGLVDYDFDQHFIATNFELKAPPCARIGHQSNQRTQQANQILIV
        ALGLVDYDFDQHFIATNFELKAPPCARIGHQSNQRTQQANQILIV
Subjt:  ALGLVDYDFDQHFIATNFELKAPPCARIGHQSNQRTQQANQILIV

KAG7036117.1 hypothetical protein SDJN02_02917, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-1659.41Show/hide
Query:  FTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQTCIE-----EETHLLQ--FW--------------------AQLMEDAIHR
        F TF+EVEPP PLRYIIGAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT  E     E  H  Q  FW                    +QLMEDAIHR
Subjt:  FTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQTCIE-----EETHLLQ--FW--------------------AQLMEDAIHR

Query:  I
        +
Subjt:  I

XP_008437060.1 PREDICTED: uncharacterized protein LOC103482600 isoform X1 [Cucumis melo]1.2e-1590.57Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

XP_008437061.1 PREDICTED: uncharacterized protein LOC103482600 isoform X2 [Cucumis melo]1.2e-1590.57Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

XP_022154814.1 uncharacterized protein LOC111021976 isoform X2 [Momordica charantia]1.5e-1588.68Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAV+M+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

TrEMBL top hitse value%identityAlignment
A0A0A0KPA4 Uncharacterized protein1.6e-1588.68Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYI GAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

A0A1S3AT37 uncharacterized protein LOC103482600 isoform X15.6e-1690.57Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

A0A1S3ATP1 uncharacterized protein LOC103482600 isoform X25.6e-1690.57Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAVIM+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

A0A6J1DLB6 uncharacterized protein LOC111021976 isoform X17.3e-1688.68Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAV+M+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

A0A6J1DNA4 uncharacterized protein LOC111021976 isoform X27.3e-1688.68Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT
        MPF+TFIEVEPP PLRYIIGAV+M+IGVVLPLGYM+FRNKRG SSSSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRG-SSSSSYSKQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16695.1 unknown protein4.7e-1573.08Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT
        MPF T IEVEPP  LRY+IG+ +M+IGVVLP+GYM+FRNKR   SSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT

AT4G16695.2 unknown protein4.7e-1573.08Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT
        MPF T IEVEPP  LRY+IG+ +M+IGVVLP+GYM+FRNKR   SSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT

AT4G16695.3 unknown protein4.7e-1573.08Show/hide
Query:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT
        MPF T IEVEPP  LRY+IG+ +M+IGVVLP+GYM+FRNKR   SSSYSKQT
Subjt:  MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTCACGACGTTCATTGAAGTGGAACCACCCGGTCCACTGCGATACATAATTGGGGCCGTTATAATGATTATCGGAGTTGTATTGCCCCTCGGATATATGGTGTT
CCGGAACAAGCGTGGTTCTTCTTCTTCTTCTTACTCCAAACAGACTTGCATAGAGGAAGAGACACATCTACTTCAGTTTTGGGCTCAGCTAATGGAGGATGCTATTCACA
GGATACAACCACAAAGGCATGAAAGTACTCTTTGTTGGTCTCCTAAGGTTATCTTTCCTCCCAGTGACTTTGAACTGAAAGCTTTAGGTTTAGTCGATTATGACTTCGAT
CAACATTTTATTGCTACTAATTTCGAGTTGAAAGCCCCGCCATGTGCAAGGATTGGACACCAAAGTAACCAACGAACTCAACAAGCCAACCAAATCTTGATTGTTTAG
mRNA sequenceShow/hide mRNA sequence
CCCCTCCCCGTCTTTTACTAAGATCCCTGGCTTCCACCTCCTGCGGTCCTCTCGCTCTGTGTTCGACAAATGCCTTTCACGACGTTCATTGAAGTGGAACCACCCGGTCC
ACTGCGATACATAATTGGGGCCGTTATAATGATTATCGGAGTTGTATTGCCCCTCGGATATATGGTGTTCCGGAACAAGCGTGGTTCTTCTTCTTCTTCTTACTCCAAAC
AGACTTGCATAGAGGAAGAGACACATCTACTTCAGTTTTGGGCTCAGCTAATGGAGGATGCTATTCACAGGATACAACCACAAAGGCATGAAAGTACTCTTTGTTGGTCT
CCTAAGGTTATCTTTCCTCCCAGTGACTTTGAACTGAAAGCTTTAGGTTTAGTCGATTATGACTTCGATCAACATTTTATTGCTACTAATTTCGAGTTGAAAGCCCCGCC
ATGTGCAAGGATTGGACACCAAAGTAACCAACGAACTCAACAAGCCAACCAAATCTTGATTGTTTAG
Protein sequenceShow/hide protein sequence
MPFTTFIEVEPPGPLRYIIGAVIMIIGVVLPLGYMVFRNKRGSSSSSYSKQTCIEEETHLLQFWAQLMEDAIHRIQPQRHESTLCWSPKVIFPPSDFELKALGLVDYDFD
QHFIATNFELKAPPCARIGHQSNQRTQQANQILIV