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Carg23218 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23218
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationCarg_Chr16:8644610..8644972
RNA-Seq ExpressionCarg23218
SyntenyCarg23218
Gene Ontology termsNA
InterPro domainsIPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577623.1 putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. sororia]6.6e-5193.33Show/hide
Query:  MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCA--------GLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVT
        MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCA        GLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVT
Subjt:  MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCA--------GLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVT

Query:  VPIVLNLCNQTAPAGTQCAI
        VPIVLNLCNQTAPAGTQCAI
Subjt:  VPIVLNLCNQTAPAGTQCAI

KAG7015665.1 putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-53100Show/hide
Query:  MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPIVLNLC
        MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPIVLNLC
Subjt:  MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPIVLNLC

Query:  NQTAPAGTQCAI
        NQTAPAGTQCAI
Subjt:  NQTAPAGTQCAI

XP_002533299.1 lipid transfer protein EARLI 1 [Ricinus communis]1.7e-1145.04Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTA--------QPMV-PPPSPSPTS--CPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLV
        K +S LALFL LNLLFFSLV+A        +P   P P+PSP+S  CPR  + + VCA  LGS    N+G     PCCS+IQGL  ++AA C+C +++  
Subjt:  KPSSLLALFLCLNLLFFSLVTA--------QPMV-PPPSPSPTS--CPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLV

Query:  NTLTANVTVP----IVLNLCNQTAPAGTQCA
        N L  N+ +P    ++LN+C +  P+G QCA
Subjt:  NTLTANVTVP----IVLNLCNQTAPAGTQCA

XP_011001498.1 PREDICTED: 14 kDa proline-rich protein DC2.15-like [Populus euphratica]1.0e-1141.98Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTAQ----PMVPPPSPSPT------SCPRGLVPVRVCAG-LGS---------NVGPCCSMIQGLTAVQAAACVCASLRL
        + K ++ LALFL +NLLFFSLVTA+    P  P P P+PT       CP+  + + VCAG LGS          V PCCS+IQGL  ++AA C+C +++ 
Subjt:  SKKPSSLLALFLCLNLLFFSLVTAQ----PMVPPPSPSPT------SCPRGLVPVRVCAG-LGS---------NVGPCCSMIQGLTAVQAAACVCASLRL

Query:  VNTLTANVTVPI----VLNLCNQTAPAGTQC
         N L  N+ +P+    +LN+C +  P G QC
Subjt:  VNTLTANVTVPI----VLNLCNQTAPAGTQC

XP_042067837.1 14 kDa proline-rich protein DC2.15-like [Salvia splendens]1.3e-1145.45Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-SCPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP
        K ++ LALFL LNLLFF+L T+     PPSP P+ SCPR  + + +CAG LGS     +G     PCCS+I+GL  ++AA C+C ++R  N L  N+ VP
Subjt:  KPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-SCPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP

Query:  ----IVLNLCNQTAPAGTQCA
            ++LN+CNQ  P    CA
Subjt:  ----IVLNLCNQTAPAGTQCA

TrEMBL top hitse value%identityAlignment
A0A2I0I8X9 14 kDa proline-rich protein DC2.15-like1.1e-1142.5Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTA-QPMVPPPSPSPTSCPRGLVPVRVCAG-----LGSNVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP
        K S+ LA F  LNLLFFSL TA  P  P PSPS  +CPR  + + VCA      L   +G     PCCS++QGL  ++AA C+C +++  N L  N+ +P
Subjt:  KPSSLLALFLCLNLLFFSLVTA-QPMVPPPSPSPTSCPRGLVPVRVCAG-----LGSNVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP

Query:  ----IVLNLCNQTAPAGTQC
            ++LN+C ++ P G QC
Subjt:  ----IVLNLCNQTAPAGTQC

A0A4D8Z4J8 AAI domain-containing protein6.5e-1245.45Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-SCPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP
        K ++ LALFL LNLLFF+L T+     PPSP P+ SCPR  + + +CAG LGS     +G     PCCS+I+GL  ++AA C+C ++R  N L  N+ VP
Subjt:  KPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-SCPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVP

Query:  ----IVLNLCNQTAPAGTQCA
            ++LN+CNQ  P    CA
Subjt:  ----IVLNLCNQTAPAGTQCA

A0A6A3BUS9 Lipid transfer protein EARLI 11.4e-1139.53Show/hide
Query:  SKKPSSLLALFLCLNLLFFSL----VTAQPMVPPPSPSPT-----SCPRGLVPVRVCAG----LGSNVG-----PCCSMIQGLTAVQAAACVCASLRLVN
        + K S+ +ALF  LN+LFFSL     T +P +P P+P+PT      CPR  + + VCA     + + VG     PCCS++QGL  ++AA C+C ++R  N
Subjt:  SKKPSSLLALFLCLNLLFFSL----VTAQPMVPPPSPSPT-----SCPRGLVPVRVCAG----LGSNVG-----PCCSMIQGLTAVQAAACVCASLRLVN

Query:  TLTANVTVPI----VLNLCNQTAPAGTQC
         L  N+ +PI    +LN+C++  P G QC
Subjt:  TLTANVTVPI----VLNLCNQTAPAGTQC

A0A6P6A5B7 14 kDa proline-rich protein DC2.15-like isoform X18.5e-1239.39Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-----------SCPRGLVPVRVCAG--------LGS-NVGPCCSMIQGLTAVQAAACVCASLRL
        + K S+ LALF  LN+LFFSLV+A+   P P P P             CPR  + + VCA         +GS  V PCCS+IQGL  ++AA C+C +++ 
Subjt:  SKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPT-----------SCPRGLVPVRVCAG--------LGS-NVGPCCSMIQGLTAVQAAACVCASLRL

Query:  VNTLTANVTVPI----VLNLCNQTAPAGTQCA
         N L  N+ +P+    +LN+C++  P+G QCA
Subjt:  VNTLTANVTVPI----VLNLCNQTAPAGTQCA

B9T4Y0 14 kDa proline-rich protein DC2.15, putative8.5e-1245.04Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTA--------QPMV-PPPSPSPTS--CPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLV
        K +S LALFL LNLLFFSLV+A        +P   P P+PSP+S  CPR  + + VCA  LGS    N+G     PCCS+IQGL  ++AA C+C +++  
Subjt:  KPSSLLALFLCLNLLFFSLVTA--------QPMV-PPPSPSPTS--CPRGLVPVRVCAG-LGS----NVG-----PCCSMIQGLTAVQAAACVCASLRLV

Query:  NTLTANVTVP----IVLNLCNQTAPAGTQCA
        N L  N+ +P    ++LN+C +  P+G QCA
Subjt:  NTLTANVTVP----IVLNLCNQTAPAGTQCA

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.153.8e-0935.82Show/hide
Query:  KPSSLLALFLCLNLLFFSLVTA-----QPMVPPPSPSPT----------SCPRGLVPVRVCA---GLGSNVG-------PCCSMIQGLTAVQAAACVCAS
        K S+ +ALF  LN+LFF+LV++      P  P P P+P            CPR  + + VCA    L  NV        PCCS+++GL  ++AA C+C +
Subjt:  KPSSLLALFLCLNLLFFSLVTA-----QPMVPPPSPSPT----------SCPRGLVPVRVCA---GLGSNVG-------PCCSMIQGLTAVQAAACVCAS

Query:  LRLVNTLTANVTVPI----VLNLCNQTAPAGTQC
        ++  N L  N+ +PI    VLN C +  P G +C
Subjt:  LRLVNTLTANVTVPI----VLNLCNQTAPAGTQC

Q39176 Lipid transfer protein EARLI 14.9e-0930.95Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA------------------------------------QPMVPPPSPSPT----------SCPRGLVPVRVCAGLGSN
        + K S+ +ALF  LN++FF+L  A                                     P VP P+P P           +CP   + + VCA + S+
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA------------------------------------QPMVPPPSPSPT----------SCPRGLVPVRVCAGLGSN

Query:  V----------GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA
        +           PCCS+IQGL  + AA C+C +LR  N L  N+ VPI    +LN+CN+  P+G QCA
Subjt:  V----------GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA

Q9SU33 pEARLI1-like lipid transfer protein 34.2e-0830.51Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA---------------------------------------------QPMVPPPSPSPT----------SCPRGLVPV
        + K S+ LALF  LN+LFF+L TA                                              P VP P+P+P           +CP   + +
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA---------------------------------------------QPMVPPPSPSPT----------SCPRGLVPV

Query:  RVCAGLGS----------NVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA
         VCA + S          +  PCCS+IQGL  + AA C+C +LR  N L  N+ VPI    +LN+CN+  P+  QCA
Subjt:  RVCAGLGS----------NVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA

Q9SU35 pEARLI1-like lipid transfer protein 13.4e-1034.16Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA----------------------------QPMVPPPSPSP-----------TSCPRGLVPVRVCAGLGSNV------
        + K S+ LALF  LN+LFF+L  A                            +P VP P+P P            SCP   + + VCA + S++      
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA----------------------------QPMVPPPSPSP-----------TSCPRGLVPVRVCAGLGSNV------

Query:  ----GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA
              CCS+IQGL  V AA C+C +LR  N L  N+ VPI    +LN+CN+  P+G QCA
Subjt:  ----GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA

Q9ZSP6 Putative lipid-binding protein AIR1B6.5e-0941.28Show/hide
Query:  PSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQ
        P + LALF+ LNLLFF+  +A     P   S  +C   L  V +  G    V PCCS+IQGL  ++AAAC+C +L+       N+ +PI    +LN+C++
Subjt:  PSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQ

Query:  TAPAGTQCA
         AP G QCA
Subjt:  TAPAGTQCA

Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein2.2e-1237.5Show/hide
Query:  SSLLALFLCLNLLFFSLVTA---------------QPMVPPPSPSPTS----CPRGLVPVRVCAGLGSN----------VGPCCSMIQGLTAVQAAACVC
        SS +ALFL LNLLFF+ ++A                   P P+PSP+S    CP+  + + VCA + +           V PCCS+IQGL  V+AA C+C
Subjt:  SSLLALFLCLNLLFFSLVTA---------------QPMVPPPSPSPTS----CPRGLVPVRVCAGLGSN----------VGPCCSMIQGLTAVQAAACVC

Query:  ASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQC
         +L+  N L  N+ +PI    +LN+C++  P G QC
Subjt:  ASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQC

AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.6e-1032.21Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA--------------------------QPMVPPPSPSP--TSCPRGLVPVRVCAGLGSN----------VGPCCSMI
        + + +  LALFL LN LFF+ ++A                              P PSPSP    CPR  + + VCA + +           V PCC++I
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA--------------------------QPMVPPPSPSP--TSCPRGLVPVRVCAGLGSN----------VGPCCSMI

Query:  QGLTAVQAAACVCASLRLVNTLTANVTVP----IVLNLCNQTAPAGTQC
        QGL  ++AAAC+C +L+  N L  N+ +P    ++LN+C++  P G QC
Subjt:  QGLTAVQAAACVCASLRLVNTLTANVTVP----IVLNLCNQTAPAGTQC

AT4G12470.1 azelaic acid induced 12.4e-1134.16Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA----------------------------QPMVPPPSPSP-----------TSCPRGLVPVRVCAGLGSNV------
        + K S+ LALF  LN+LFF+L  A                            +P VP P+P P            SCP   + + VCA + S++      
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA----------------------------QPMVPPPSPSP-----------TSCPRGLVPVRVCAGLGSNV------

Query:  ----GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA
              CCS+IQGL  V AA C+C +LR  N L  N+ VPI    +LN+CN+  P+G QCA
Subjt:  ----GPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPI----VLNLCNQTAPAGTQCA

AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.2e-1137.21Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA----QPMVPPPSPSPT---SCPRGLVPVRVCAG---------LGS-NVGPCCSMIQGLTAVQAAACVCASLRLVNT
        + K S+ L +FL  N+LFF+L TA        P P P P    SCP+  + + VCA          LG+  V PCCS++ GL  ++AAAC+C +L+    
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA----QPMVPPPSPSPT---SCPRGLVPVRVCAG---------LGS-NVGPCCSMIQGLTAVQAAACVCASLRLVNT

Query:  LTANVTVPI----VLNLCNQTAPAGTQCA
        L  N+ VP+    +LN+C +  P+G  CA
Subjt:  LTANVTVPI----VLNLCNQTAPAGTQCA

AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.2e-1137.21Show/hide
Query:  SKKPSSLLALFLCLNLLFFSLVTA----QPMVPPPSPSPT---SCPRGLVPVRVCAG---------LGS-NVGPCCSMIQGLTAVQAAACVCASLRLVNT
        + K S+ L +FL  N+LFF+L TA        P P P P    SCP+  + + VCA          LG+  V PCCS++ GL  ++AAAC+C +L+    
Subjt:  SKKPSSLLALFLCLNLLFFSLVTA----QPMVPPPSPSPT---SCPRGLVPVRVCAG---------LGS-NVGPCCSMIQGLTAVQAAACVCASLRLVNT

Query:  LTANVTVPI----VLNLCNQTAPAGTQCA
        L  N+ VP+    +LN+C +  P+G  CA
Subjt:  LTANVTVPI----VLNLCNQTAPAGTQCA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCTTCCAAGAAACCAAGCTCCCTTCTTGCTCTCTTTTTATGTCTTAACCTTCTCTTCTTTTCTCTTGTCACTGCTCAGCCAATGGTACCACCGCCAAGCCCCAG
CCCAACTTCCTGCCCTAGAGGCCTCGTCCCGGTACGTGTATGTGCAGGCCTTGGCTCTAACGTGGGTCCATGTTGCTCCATGATTCAAGGGTTAACGGCTGTTCAGGCTG
CTGCCTGTGTTTGCGCTTCTCTCCGGCTTGTTAACACTCTCACTGCAAACGTTACTGTTCCCATCGTACTTAACCTATGCAACCAAACTGCTCCTGCTGGAACCCAGTGT
GCCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTCTTCCAAGAAACCAAGCTCCCTTCTTGCTCTCTTTTTATGTCTTAACCTTCTCTTCTTTTCTCTTGTCACTGCTCAGCCAATGGTACCACCGCCAAGCCCCAG
CCCAACTTCCTGCCCTAGAGGCCTCGTCCCGGTACGTGTATGTGCAGGCCTTGGCTCTAACGTGGGTCCATGTTGCTCCATGATTCAAGGGTTAACGGCTGTTCAGGCTG
CTGCCTGTGTTTGCGCTTCTCTCCGGCTTGTTAACACTCTCACTGCAAACGTTACTGTTCCCATCGTACTTAACCTATGCAACCAAACTGCTCCTGCTGGAACCCAGTGT
GCCATCTAA
Protein sequenceShow/hide protein sequence
MCSSKKPSSLLALFLCLNLLFFSLVTAQPMVPPPSPSPTSCPRGLVPVRVCAGLGSNVGPCCSMIQGLTAVQAAACVCASLRLVNTLTANVTVPIVLNLCNQTAPAGTQC
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