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Carg23241 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23241
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnovel plant SNARE 11-like
Genome locationCarg_Chr16:8900913..8902874
RNA-Seq ExpressionCarg23241
SyntenyCarg23241
Gene Ontology termsGO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0009504 - cell plate (cellular component)
GO:0012507 - ER to Golgi transport vesicle membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0031902 - late endosome membrane (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR005606 - Sec20
IPR044766 - NPSN/SNAP25-like, N-terminal SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041036.1 putative plant SNARE 11 [Cucumis melo var. makuwa]2.9e-5895.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQL+D GN+MMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDI+DIPGLAPP QSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

KAG7015688.1 putative plant SNARE 11, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-60100Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

XP_008448761.1 PREDICTED: novel plant SNARE 11 [Cucumis melo]2.9e-5895.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQL+D GN+MMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDI+DIPGLAPP QSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

XP_022923361.1 novel plant SNARE 11-like [Cucurbita moschata]1.8e-60100Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

XP_023553230.1 novel plant SNARE 11-like [Cucurbita pepo subsp. pepo]1.8e-60100Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

TrEMBL top hitse value%identityAlignment
A0A1S3BLC3 novel plant SNARE 111.4e-5895.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQL+D GN+MMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDI+DIPGLAPP QSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

A0A5A7TG65 Putative plant SNARE 111.4e-5895.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQL+D GN+MMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDI+DIPGLAPP QSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

A0A5D3CJJ3 Putative plant SNARE 111.4e-5895.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQL+D GN+MMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDI+DIPGLAPP QSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

A0A6J1E6L5 novel plant SNARE 11-like8.8e-61100Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

A0A6J1HN11 novel plant SNARE 11-like8.8e-61100Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
        KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLWNSG

SwissProt top hitse value%identityAlignment
O88384 Vesicle transport through interaction with t-SNAREs homolog 1B4.3e-0423.47Show/hide
Query:  TNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIII
        + + L+ +G + ++   ++IERS ++  ET  +GTE    L  Q +Q+ R  + L + + +L K+ K+++ + R++ T+K +++++ ++ L ++  ++
Subjt:  TNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIII

Q54CK6 Vesicle transport through interaction with t-SNAREs homolog 1A5.6e-0426.37Show/hide
Query:  RGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIII
        +G+ M+D T + + R+ ++  ++  +G      L  Q EQ+  + ++L      +K A K++  + R++AT+K I++++ ++++G+IA+II
Subjt:  RGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIII

Q944A9 Novel plant SNARE 115.0e-5380.77Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+L+D+GN MMD+TD+AIER KK+VQET+NVGT+T+AALKAQTEQMSR+VNELDSIHFSLKKASKLVKE+GRQ+ATDKCIMA LF+IV+GVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIP--GLAPPAQSRKLLWN
        K+VNPNNKDI+DIP  GLAPPA +R+LLWN
Subjt:  KLVNPNNKDIQDIP--GLAPPAQSRKLLWN

Q9LNH6 Novel plant SNARE 123.1e-4776.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+LVD G K MDETD+AIERSK+VV +T+ VGT+TA+ LK QT+QM R+VN+LD+I FSLKKAS+LVKE+GRQ+ATDKCIMA LF+IV GVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLW
        K+VNPNNKDI+DIPGLAPPAQSRKLL+
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLW

Q9LRP1 Novel plant SNARE 139.0e-4774.8Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+LVD G K MDETD+AIERSK+VV++T+ VGT+TAA LK QT+QM R+VN LD+I FS+KKAS+LVKE+GRQ+ATDKCIM  LF+IV GV+AIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLW
        K+VNPNNKDI+DIPGLAPPAQSRKLL+
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLW

Arabidopsis top hitse value%identityAlignment
AT1G48240.1 novel plant snare 122.2e-4876.38Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+LVD G K MDETD+AIERSK+VV +T+ VGT+TA+ LK QT+QM R+VN+LD+I FSLKKAS+LVKE+GRQ+ATDKCIMA LF+IV GVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLW
        K+VNPNNKDI+DIPGLAPPAQSRKLL+
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLW

AT2G35190.1 novel plant snare 113.5e-5480.77Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+L+D+GN MMD+TD+AIER KK+VQET+NVGT+T+AALKAQTEQMSR+VNELDSIHFSLKKASKLVKE+GRQ+ATDKCIMA LF+IV+GVIAIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIP--GLAPPAQSRKLLWN
        K+VNPNNKDI+DIP  GLAPPA +R+LLWN
Subjt:  KLVNPNNKDIQDIP--GLAPPAQSRKLLWN

AT3G17440.1 novel plant snare 136.4e-4874.8Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV
        M+NQ+LVD G K MDETD+AIERSK+VV++T+ VGT+TAA LK QT+QM R+VN LD+I FS+KKAS+LVKE+GRQ+ATDKCIM  LF+IV GV+AIIIV
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIV

Query:  KLVNPNNKDIQDIPGLAPPAQSRKLLW
        K+VNPNNKDI+DIPGLAPPAQSRKLL+
Subjt:  KLVNPNNKDIQDIPGLAPPAQSRKLLW

AT3G17440.2 novel plant snare 132.5e-2368.83Show/hide
Query:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQI
        M+NQ+LVD G K MDETD+AIERSK+VV++T+ VGT+TAA LK QT+QM R+VN LD+I FS+KKAS+LVKE+GRQ+
Subjt:  MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATCAACAATTGGTTGATAGGGGAAACAAAATGATGGATGAGACTGATGAAGCAATTGAGAGGTCTAAAAAGGTAGTTCAAGAGACGGTGAACGTAGGAACAGA
GACAGCAGCAGCTCTGAAGGCGCAGACGGAGCAAATGAGCAGGATAGTGAACGAGCTCGACTCAATACATTTCTCACTTAAGAAAGCCTCAAAACTGGTGAAAGAATTAG
GGAGACAAATTGCAACTGATAAGTGTATAATGGCCCTCCTCTTCATTATTGTCCTTGGTGTCATTGCCATCATCATAGTCAAGCTGGTGAATCCAAATAACAAGGACATT
CAGGACATCCCGGGGCTGGCACCGCCCGCCCAGAGCCGAAAACTGCTATGGAATTCCGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATCAACAATTGGTTGATAGGGGAAACAAAATGATGGATGAGACTGATGAAGCAATTGAGAGGTCTAAAAAGGTAGTTCAAGAGACGGTGAACGTAGGAACAGA
GACAGCAGCAGCTCTGAAGGCGCAGACGGAGCAAATGAGCAGGATAGTGAACGAGCTCGACTCAATACATTTCTCACTTAAGAAAGCCTCAAAACTGGTGAAAGAATTAG
GGAGACAAATTGCAACTGATAAGTGTATAATGGCCCTCCTCTTCATTATTGTCCTTGGTGTCATTGCCATCATCATAGTCAAGCTGGTGAATCCAAATAACAAGGACATT
CAGGACATCCCGGGGCTGGCACCGCCCGCCCAGAGCCGAAAACTGCTATGGAATTCCGGTTAAAACCCCGAGTTACAAAGAAGAATCATCGTCCATATCCCGAAACGTAC
TCGATCTTCTGGGAATGCTGTGCACAATTAGGTAGCTACGTGAATTTGTTCTAGCCTTTTGTAGCTTGTGAGATAATAAGCTGTAGGGGCTGAATGAATGAAGGAAGGAT
AGGCAAAGCAGCATGGGGGGGACAGCCAAGCCAGGTTCTTTCCTATGCCTACAACTGACATTCATTCTCACTGTCTCTTGTCCTGTTCTGTCCTGTTCTTGAGATTTTAT
TGATTTTTATGTTTGGTTTTGTCTGTATAAATCTTAATCACTCATATATTCTATCATTTTACATTCATGTTTGGGGATTCATAATTATTATTTATGTTATTGTCACACTG
ATAATGTATATTAGATAATTCTCGGGCACATTGAAAATGACCTATCGGGTTCTGTTAGTTCATAGACACAAAAAATGACCGATCGATTTTTGTTAGTTCATAGAGACACC
AAAAATGACTTATCAGT
Protein sequenceShow/hide protein sequence
MTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIVKLVNPNNKDI
QDIPGLAPPAQSRKLLWNSG