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Carg23244 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23244
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF2052 domain-containing protein
Genome locationCarg_Chr16:8919424..8922210
RNA-Seq ExpressionCarg23244
SyntenyCarg23244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596899.1 hypothetical protein SDJN03_10079, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0636.29Show/hide
Query:  AATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPISDELHFR
        AA GL+CEAMDCLSERLSLQ                                                                      SP SDELH R
Subjt:  AATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPISDELHFR

Query:  SVIVKNRRRAYLNKLICDGHSYSD
        SV+VKNRRRAYLNKLICDG  +S+
Subjt:  SVIVKNRRRAYLNKLICDGHSYSD

KAG7015691.1 hypothetical protein SDJN02_23328, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-45100Show/hide
Query:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSDHETGKIRDDASANELMMIRDEMMNATKRLG
        METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSDHETGKIRDDASANELMMIRDEMMNATKRLG
Subjt:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSDHETGKIRDDASANELMMIRDEMMNATKRLG

XP_022923198.1 uncharacterized protein LOC111430964 [Cucurbita moschata]8.4e-07100Show/hide
Query:  METATMEPTEKAATGLNCEAMDCLSERLSLQ
        METATMEPTEKAATGLNCEAMDCLSERLSLQ
Subjt:  METATMEPTEKAATGLNCEAMDCLSERLSLQ

XP_022965224.1 uncharacterized protein LOC111465143 isoform X1 [Cucurbita maxima]2.5e-1958.18Show/hide
Query:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKL---------------ICDGHSYSDHETGKIRDDASANELMMIRD
        METATME TEKAA GLNCEAMDCLSERLSL   I     F +     R+   L+ L                C+  SYSDHETGK RDDASAN+LMMI D
Subjt:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKL---------------ICDGHSYSDHETGKIRDDASANELMMIRD

Query:  EMMNATKRLG
        EMMNA KRLG
Subjt:  EMMNATKRLG

XP_038906003.1 coiled-coil domain-containing protein 97 [Benincasa hispida]1.3e-0738.24Show/hide
Query:  METATMEPTEKAAT-GLNCEAMDCLSERLSLQ--------------------------------------------------------------------
        ME ATME  E AA  GL+CEAMDCLSERLSLQ                                                                    
Subjt:  METATMEPTEKAAT-GLNCEAMDCLSERLSLQ--------------------------------------------------------------------

Query:  --SPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD
          SP SDELH RSVIVKNRRRAYLNKLI DG  +S+
Subjt:  --SPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD

TrEMBL top hitse value%identityAlignment
A0A0A0L5C7 Uncharacterized protein1.3e-0535.88Show/hide
Query:  MEPTEKA-ATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPI
        ME  E A A GL+CEAMDCLSERLSLQ                                                                      +P 
Subjt:  MEPTEKA-ATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPI

Query:  SDELHFRSVIVKNRRRAYLNKLICDGHSYSD
        SDELH RSVIVKNRRRAYLNKLI DG  +S+
Subjt:  SDELHFRSVIVKNRRRAYLNKLICDGHSYSD

A0A6J1DQL7 coiled-coil domain-containing protein 976.9e-0778.38Show/hide
Query:  SLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD
        S++SP SDELH RSVIVKNRRRAYLNKLICDG  +S+
Subjt:  SLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD

A0A6J1E8W5 uncharacterized protein LOC1114309644.1e-07100Show/hide
Query:  METATMEPTEKAATGLNCEAMDCLSERLSLQ
        METATMEPTEKAATGLNCEAMDCLSERLSLQ
Subjt:  METATMEPTEKAATGLNCEAMDCLSERLSLQ

A0A6J1F5X8 coiled-coil domain-containing protein 975.3e-0736.29Show/hide
Query:  AATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPISDELHFR
        AA GL+CEAMDCLSERLSLQ                                                                      SP SDELH R
Subjt:  AATGLNCEAMDCLSERLSLQ----------------------------------------------------------------------SPISDELHFR

Query:  SVIVKNRRRAYLNKLICDGHSYSD
        SV+VKNRRRAYLNKLICDG  +S+
Subjt:  SVIVKNRRRAYLNKLICDGHSYSD

A0A6J1HQE8 uncharacterized protein LOC111465143 isoform X11.2e-1958.18Show/hide
Query:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKL---------------ICDGHSYSDHETGKIRDDASANELMMIRD
        METATME TEKAA GLNCEAMDCLSERLSL   I     F +     R+   L+ L                C+  SYSDHETGK RDDASAN+LMMI D
Subjt:  METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKL---------------ICDGHSYSDHETGKIRDDASANELMMIRD

Query:  EMMNATKRLG
        EMMNA KRLG
Subjt:  EMMNATKRLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G47090.1 unknown protein1.4e-0455.88Show/hide
Query:  SPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD
        SP S+E+  RSV V+NRR AYLNKL+ +G  +S+
Subjt:  SPISDELHFRSVIVKNRRRAYLNKLICDGHSYSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGGCGACGATGGAGCCGACGGAGAAAGCGGCCACGGGATTGAATTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGAGTCCGATATCAGATGA
ACTACACTTTAGGTCAGTTATTGTGAAGAATAGGAGACGAGCATATCTGAATAAACTGATATGTGATGGCCACTCTTATTCAGATCACGAAACTGGAAAGATACGAGATG
ATGCAAGTGCGAACGAGCTGATGATGATCCGTGATGAGATGATGAATGCAACTAAAAGACTCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGGCGACGATGGAGCCGACGGAGAAAGCGGCCACGGGATTGAATTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGAGTCCGATATCAGATGA
ACTACACTTTAGGTCAGTTATTGTGAAGAATAGGAGACGAGCATATCTGAATAAACTGATATGTGATGGCCACTCTTATTCAGATCACGAAACTGGAAAGATACGAGATG
ATGCAAGTGCGAACGAGCTGATGATGATCCGTGATGAGATGATGAATGCAACTAAAAGACTCGGCTGAATGATGTCGTAATCCTGGTAAGATTAAAAAATGATCTCTGTG
CTAACTTTTAATGGCAAGGGTAGAGGTTCTTCGAGGTGTATGGTGATATAATTGTGTGCCACACTCCATGAGATTGGTATTAGCCTTTTGCAGTTCCTTTAGCTTTTGCC
TCAACTGAAACCTTGCAAGTTCTACTCATGTTCTTTCTGTCTGATGAATATTTTTCCGTTTTTGAACTTAGTTTCTGAATGTGTGAATATTGAGCGGTAGAAGTAAGGAG
ATTTGAACGTTTGACTTCGAAGTCCGAAAAAAATGTACCTTGACTTGTTAAGCTATGGTTAAGTTGACATCATTGTATAGCTATTTTTACTAGAGATGTTCATTTTACTT
GCGGGGTCGATAGAGAATTTCTCGTTTAGACTGAGAATGAGGAAGGGAATCAAGACTATGTAACATTTGAATTTTTAAAAATTACTTTCGTAGAACCTTGTGTGCGGGAA
TCTCTGTCCTGGTTCTCATAAATGTAAATTGAGAATTTTTTAGGGACGAAGATAGCAAAGGCTTCCTTATCTTCGTCCCGGTAAACATCTCTAATTTTTTTTTTTTTACT
TGATAACATTTAAAATCAGCTAAAT
Protein sequenceShow/hide protein sequence
METATMEPTEKAATGLNCEAMDCLSERLSLQSPISDELHFRSVIVKNRRRAYLNKLICDGHSYSDHETGKIRDDASANELMMIRDEMMNATKRLG