CuGenDBv2

Gene ID	Carg23248
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	Carg_Chr16:8954643..8956710
RNA-Seq Expression	Carg23248
Synteny	Carg23248
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR023329 - Chlorophyll a/b binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577656.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-138

99.21

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV PAVVQKDPEPVVEKQE LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

KAG7015695.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-139

100

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

XP_022923520.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita moschata]

7.9e-137

98.42

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV  AVVQKDPEPVVEKQE LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

2.1e-137

98.02

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV PAVVQKDPEP VEK+ESLAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

XP_023552068.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo subsp. pepo]

2.0e-135

97.23

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSM+LFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAA NGAGISGGS+AV PAVVQKDPEPVVEKQES+AETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

1.2e-114

83.52

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS--------WVAADNGAGISGGS--VAVGPAVVQKDPEP---VVEKQESLAETNGSVAAV
        MSSMALFSP S LS+ SP SHH +HF  RPFSSLR+RNPSS           ADNGAGISGGS  V+V   V QKDPEP     E+QESLA TNGSVAA 
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS--------WVAADNGAGISGGS--VAVGPAVVQKDPEP---VVEKQESLAETNGSVAAV

Query:  EEVV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        SLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

A0A1S3BLD8 uncharacterized protein LOC103490842

5.4e-115

84.21

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEE
        MSSMALFSP S LS+LSPSSHH +HF  RPFSSLR+RNPSS            ADNGAGISGGS  VAV   V QKDPEP    +ESLA TNGSVAA EE
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEE

Query:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSL
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSL
Subjt:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGKV
        TGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK+
Subjt:  TGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGKV

A0A5A7TG76 Uncharacterized protein

3.2e-115

84.21

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEE
        MSSMALFSP S LS+LSPSSHH +HF  RPFSSLR+RNPSS            ADNGAGISGGS  VAV   V QKDPEP    +ESLA TNGSVAA EE
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEE

Query:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSL
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSL
Subjt:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGKV
        TGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK+
Subjt:  TGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGKV

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

3.8e-137

98.42

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV  AVVQKDPEPVVEKQE LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.0e-137

98.02

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV PAVVQKDPEP VEK+ESLAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNF

Query:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
        FCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV
Subjt:  FCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKV

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

9.3e-72

57.77

Show/hide

Query:  SMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV----GPAVVQKDPEPVVEKQE-SLAETNGSV---AAVEEVVVVS
        SMALFSPP   S  +P      +   +  +SL S    S ++    +  +G +  V     PA V  +  PV    E S A  NG+V   A       V 
Subjt:  SMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV----GPAVVQKDPEPVVEKQE-SLAETNGSV---AAVEEVVVVS

Query:  KFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLV
        K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ V+FDTSI+PWWAW+KRYHLPEAE+LNGRAAM+GFFMAYFVDSLTGVGLV
Subjt:  KFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLV

Query:  GQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD
         QMGNFFCKTLLF+AV GVL IRKNED++ LK L DETT YDKQWQA W++
Subjt:  GQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

5.6e-77

58.87

Show/hide

Query:  MALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPS--SWVAADNGAGISGGSVAVG-------PAVVQKDPE--PVVEKQESLAETNGSVAAVEEVVV
        MALFSPP   SSL     + +  P   FS L S   S  S   A + +G +  + AV          +V++ P+  P V+K+E+    N +V   E    
Subjt:  MALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPS--SWVAADNGAGISGGSVAVG-------PAVVQKDPE--PVVEKQESLAETNGSVAAVEEVVV

Query:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTG
          V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PVLFDTSI+PWWAWIKRYHLPEAE+LNGRAAM+GFFMAYFVDSLTG
Subjt:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK
        VGLV QMGNFFCKTLLF+AV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  VGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

4.0e-78

58.87

Show/hide

Query:  MALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPS--SWVAADNGAGISGGSVAVG-------PAVVQKDPE--PVVEKQESLAETNGSVAAVEEVVV
        MALFSPP   SSL     + +  P   FS L S   S  S   A + +G +  + AV          +V++ P+  P V+K+E+    N +V   E    
Subjt:  MALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPS--SWVAADNGAGISGGSVAVG-------PAVVQKDPE--PVVEKQESLAETNGSVAAVEEVVV

Query:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTG
          V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PVLFDTSI+PWWAWIKRYHLPEAE+LNGRAAM+GFFMAYFVDSLTG
Subjt:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK
        VGLV QMGNFFCKTLLF+AV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  VGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

6.6e-73

57.77

Show/hide

Query:  SMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV----GPAVVQKDPEPVVEKQE-SLAETNGSV---AAVEEVVVVS
        SMALFSPP   S  +P      +   +  +SL S    S ++    +  +G +  V     PA V  +  PV    E S A  NG+V   A       V 
Subjt:  SMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV----GPAVVQKDPEPVVEKQE-SLAETNGSV---AAVEEVVVVS

Query:  KFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLV
        K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ V+FDTSI+PWWAW+KRYHLPEAE+LNGRAAM+GFFMAYFVDSLTGVGLV
Subjt:  KFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLV

Query:  GQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD
         QMGNFFCKTLLF+AV GVL IRKNED++ LK L DETT YDKQWQA W++
Subjt:  GQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCCATGGCTTTGTTTTCTCCTCCTTCCCGTCTTTCCTCTCTCTCTCCTTCTTCACATCACCGAAGCCACTTCCCCTCCAGACCCTTTTCCTCTCTCAGGTCCAG
AAACCCTTCTTCTTGGGTCGCTGCTGACAATGGCGCCGGAATTTCAGGTGGTTCCGTCGCTGTAGGACCCGCCGTCGTACAGAAGGATCCGGAGCCGGTGGTGGAAAAGC
AAGAGAGCCTTGCTGAAACCAATGGGTCGGTGGCGGCTGTGGAAGAAGTGGTGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGAACTTGGGATTTGAATCAG
TTCCGGAAAGATGGAAGTACTGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGCT
GTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGATTCTCAATGGGCGTGCAGCCATGGTGGGGTTTTTCATGGCTTACT
TCGTCGATAGCTTGACGGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTATTGCAGTGGTGGGAGTTCTTTTGATCAGAAAGAACGAA
GATATAGAGACTCTAAAGAAGTTGATTGATGAGACGACATTTTATGATAAACAATGGCAAGCAACTTGGCAGGATGAAACCAAAGGCTCAGGCAAAGTGTAA

mRNA sequence

Show/hide mRNA sequence

AAAGCTTCCCTATCCATCACAATTACAAGGCTGAGGATAGAGGAGGAGCTCTCTCTTCTTCCTTCCACACCAAAACAATGTCTTCCATGGCTTTGTTTTCTCCTCCTTCC
CGTCTTTCCTCTCTCTCTCCTTCTTCACATCACCGAAGCCACTTCCCCTCCAGACCCTTTTCCTCTCTCAGGTCCAGAAACCCTTCTTCTTGGGTCGCTGCTGACAATGG
CGCCGGAATTTCAGGTGGTTCCGTCGCTGTAGGACCCGCCGTCGTACAGAAGGATCCGGAGCCGGTGGTGGAAAAGCAAGAGAGCCTTGCTGAAACCAATGGGTCGGTGG
CGGCTGTGGAAGAAGTGGTGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGAACTTGGGATTTGAATCAGTTCCGGAAAGATGGAAGTACTGATTGGGATGCT
GTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGCTGTTTGACACATCCATAGTTCCTTGGTGGGCTTG
GATTAAGCGCTACCATCTGCCAGAGGCTGAGATTCTCAATGGGCGTGCAGCCATGGTGGGGTTTTTCATGGCTTACTTCGTCGATAGCTTGACGGGGGTAGGACTAGTAG
GTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTATTGCAGTGGTGGGAGTTCTTTTGATCAGAAAGAACGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAG
ACGACATTTTATGATAAACAATGGCAAGCAACTTGGCAGGATGAAACCAAAGGCTCAGGCAAAGTGTAATGTGGCAAAGTTGCCTGTGTTCTTGTTTTGCTTTAATTATG
TTTGTATCTCTTAAGATTTGGGCTTAGTAGAGACGGATAATGTGAGCTCTGAAAGATATTCAATGTTTAGGCCTCAGTTTGTTC

Protein sequence

Show/hide protein sequence

MSSMALFSPPSRLSSLSPSSHHRSHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVGPAVVQKDPEPVVEKQESLAETNGSVAAVEEVVVVSKFEDPKWVNGTWDLNQ
FRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNE
DIETLKKLIDETTFYDKQWQATWQDETKGSGKV

Carg23248 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome