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Carg23282 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23282
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCST complex subunit TEN1
Genome locationCarg_Chr12:10060408..10061762
RNA-Seq ExpressionCarg23282
SyntenyCarg23282
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0019827 - stem cell population maintenance (biological process)
GO:0048367 - shoot system development (biological process)
GO:0051974 - negative regulation of telomerase activity (biological process)
GO:1990879 - CST complex (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0010521 - telomerase inhibitor activity (molecular function)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR029146 - CST complex subunit Ten1, animal and plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021073.1 CST complex subunit TEN1 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-68100Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

XP_022156372.1 CST complex subunit TEN1 isoform X1 [Momordica charantia]1.5e-5282.61Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MAS+AIKSGALV LKDLKPSSEFFKDGASLRVT             G+LVEYSVETA+A+IVDGNV+LKIDT+HLREL+FRIGSIYQFIGELLVQS+NEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLL+QFQADH NKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

XP_022937765.1 CST complex subunit TEN1 [Cucurbita moschata]2.2e-5689.86Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

XP_022966009.1 CST complex subunit TEN1-like [Cucurbita maxima]6.4e-5689.13Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

XP_023536947.1 CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo]1.4e-5588.41Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQS+NEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LFY0 Uncharacterized protein8.2e-4980.58Show/hide
Query:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENE
        MA +AIKSGALVSLKDL  PSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNV+LKIDT+HL EL+ RIGSIYQFIGELLVQS+NE
Subjt:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENE

Query:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        A L+ARVGRNVDGIDLNLYHQSLQLL+QFQADHLNKRTN
Subjt:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

A0A1S3BY71 CST complex subunit TEN16.7e-5182.73Show/hide
Query:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENE
        MA +AIKSGALVSLKDL KPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNV+LKIDT+HLREL+ RIGSIYQFIGELLVQS+NE
Subjt:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENE

Query:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        A LQARVGRNVDGIDLNLYHQSLQLL+QFQADHLNKRTN
Subjt:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1DRX0 CST complex subunit TEN1 isoform X17.1e-5382.61Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MAS+AIKSGALV LKDLKPSSEFFKDGASLRVT             G+LVEYSVETA+A+IVDGNV+LKIDT+HLREL+FRIGSIYQFIGELLVQS+NEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLL+QFQADH NKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1FHR1 CST complex subunit TEN11.1e-5689.86Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1HSH0 CST complex subunit TEN1-like3.1e-5689.13Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

SwissProt top hitse value%identityAlignment
Q6NME7 CST complex subunit TEN19.0e-2951.85Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENE
        MA + I+ G  ++L++L PSS F+K+G SLRVT               L  YSVETAI +I DG  SLKI+T+++R+++FR+GSIYQFIGEL + Q  NE
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENE

Query:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLN
        A LQAR GRNVDGID+NLY ++++LL+QF  +  N
Subjt:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLN

Arabidopsis top hitse value%identityAlignment
AT1G56260.1 unknown protein6.4e-3051.85Show/hide
Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENE
        MA + I+ G  ++L++L PSS F+K+G SLRVT               L  YSVETAI +I DG  SLKI+T+++R+++FR+GSIYQFIGEL + Q  NE
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENE

Query:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLN
        A LQAR GRNVDGID+NLY ++++LL+QF  +  N
Subjt:  ATLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACCTGAAGCCATCTTCAGAGTTCTTCAAGGATGGGGCTTCACTTAGAGTTACTGGAAATGACAA
TGAAAGTAATTACCATCTGTTCTTCAAGGGCAGGTTAGTGGAGTATTCTGTGGAGACAGCCATTGCCATAATCGTCGATGGAAATGTTAGCTTGAAGATCGACACACGGC
ATCTGAGAGAGCTTACCTTTCGCATTGGCTCCATATATCAATTTATTGGTGAACTACTTGTTCAATCAGAAAATGAGGCAACTCTGCAGGCACGTGTTGGTAGGAATGTT
GACGGCATTGACCTGAACCTGTATCATCAGTCCCTACAACTGTTAAAACAATTTCAGGCTGATCACTTAAACAAGAGAACAAATTAG
mRNA sequenceShow/hide mRNA sequence
TTGAGCTGTTACATTTTGTCTTCGTTACGAAGAATTTATTGATTGTTTACTTAGATTTACATATCTTTCCTGTAGGATTTGACTCTTAGTAGGGAGCAAAGTGCTTTTTG
TGAGAAAAAGAATTATACTGGATGGCATCGGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACCTGAAGCCATCTTCAGAGTTCTTCAAGGATGGGGCTTCACT
TAGAGTTACTGGAAATGACAATGAAAGTAATTACCATCTGTTCTTCAAGGGCAGGTTAGTGGAGTATTCTGTGGAGACAGCCATTGCCATAATCGTCGATGGAAATGTTA
GCTTGAAGATCGACACACGGCATCTGAGAGAGCTTACCTTTCGCATTGGCTCCATATATCAATTTATTGGTGAACTACTTGTTCAATCAGAAAATGAGGCAACTCTGCAG
GCACGTGTTGGTAGGAATGTTGACGGCATTGACCTGAACCTGTATCATCAGTCCCTACAACTGTTAAAACAATTTCAGGCTGATCACTTAAACAAGAGAACAAATTAGTT
CACTTTTCACCTTGAGGAGGTAATCCAGCTTATCTTTGAAATTTTAAAGTAGGAATGACTTTTTACTTTTACTTTTGCGTCTGTAAAGAAGATCTCAG
Protein sequenceShow/hide protein sequence
MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGNDNESNYHLFFKGRLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNV
DGIDLNLYHQSLQLLKQFQADHLNKRTN