; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23291 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23291
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCarg_Chr12:10115286..10117425
RNA-Seq ExpressionCarg23291
SyntenyCarg23291
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586246.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.0e-38100Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADET
        MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADET
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADET

KAG7021082.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-45100Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
        MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV

XP_022937541.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita moschata]2.7e-4297.73Show/hide
Query:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
        +VERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREP+YLYINSTGTTRDADETLLDPQSVKLGWV
Subjt:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV

XP_022966028.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like isoform X1 [Cucurbita maxima]5.6e-4093.18Show/hide
Query:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
        +VERSVSY+EHTSRRPPPELPSLLLHGRIIYIGMPFVPAV ELVIAELMYLQWMDP+EP+YLYINSTGTTRD DETLLDPQSVKLGWV
Subjt:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV

XP_038890491.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida]1.3e-3387.8Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        MAAPAQVERSVSYNEH  RRPPP+LPSLLLHGRI+YIGMP VPAVTELVIAELMYLQWMDP+EP+YLYINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

TrEMBL top hitse value%identityAlignment
A0A1S3BXZ3 ATP-dependent Clp protease proteolytic subunit1.5e-3384.15Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        MAAPAQVERSVSYNEH  RRPPP+LPSLLLHGRI+YIGMP VPAVTEL++AELMYLQWMDP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

A0A5A7U3K5 ATP-dependent Clp protease proteolytic subunit1.5e-3384.15Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        MAAPAQVERSVSYNEH  RRPPP+LPSLLLHGRI+YIGMP VPAVTEL++AELMYLQWMDP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

A0A5D3CQV3 ATP-dependent Clp protease proteolytic subunit1.5e-3384.15Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        MAAPAQVERSVSYNEH  RRPPP+LPSLLLHGRI+YIGMP VPAVTEL++AELMYLQWMDP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

A0A6J1FAM0 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like1.3e-4297.73Show/hide
Query:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
        +VERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREP+YLYINSTGTTRDADETLLDPQSVKLGWV
Subjt:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV

A0A6J1HQN5 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like isoform X12.7e-4093.18Show/hide
Query:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV
        +VERSVSY+EHTSRRPPPELPSLLLHGRIIYIGMPFVPAV ELVIAELMYLQWMDP+EP+YLYINSTGTTRD DETLLDPQSVKLGWV
Subjt:  QVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV

SwissProt top hitse value%identityAlignment
P74466 Putative ATP-dependent Clp protease proteolytic subunit-like3.0e-1246.75Show/hide
Query:  RSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPA----------VTELVIAELMYLQWMDPREPVYLYINSTGTT
        +S  Y +   + PPP+L SLLL  RI+Y+GMP   +          VT+L+IA+L+YLQ+ DP +P+Y YINSTGT+
Subjt:  RSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPA----------VTELVIAELMYLQWMDPREPVYLYINSTGTT

Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic9.1e-3376.83Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        M++PAQVERSV+YNEH  R PPP+LPS+LL GRI+YIGMP VPAVTELV+AELMYLQW+DP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic2.9e-1551.47Show/hide
Query:  RPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQS
        +PPP+L S L   RI+Y+GM  VP+VTEL++AE +YLQ+ D  +P+YLYINSTGTT++ ++   D ++
Subjt:  RPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQS

Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like2.7e-1345.88Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPA----------VTELVIAELMYLQWMDPREPVYLYINSTGTT
        M    Q  ++  Y + + R PPP+LPSLLL  RIIY+GMP   +          VTEL+IA+L+YL++ +P +P+Y YINSTGT+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPA----------VTELVIAELMYLQWMDPREPVYLYINSTGTT

Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic6.5e-1557.81Show/hide
Query:  RRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        R  PP+LPSLLL  RI Y+GMP VPAVTEL++A+ M+L + +P +P+YLYINS GT  +  ET+
Subjt:  RRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

Arabidopsis top hitse value%identityAlignment
AT1G09130.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein6.4e-3476.83Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        M++PAQVERSV+YNEH  R PPP+LPS+LL GRI+YIGMP VPAVTELV+AELMYLQW+DP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

AT1G09130.2 ATP-dependent caseinolytic (Clp) protease/crotonase family protein6.4e-3476.83Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        M++PAQVERSV+YNEH  R PPP+LPS+LL GRI+YIGMP VPAVTELV+AELMYLQW+DP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

AT1G09130.3 ATP-dependent caseinolytic (Clp) protease/crotonase family protein6.4e-3476.83Show/hide
Query:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        M++PAQVERSV+YNEH  R PPP+LPS+LL GRI+YIGMP VPAVTELV+AELMYLQW+DP+EP+Y+YINSTGTTRD  ET+
Subjt:  MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

AT1G49970.1 CLP protease proteolytic subunit 14.6e-1657.81Show/hide
Query:  RRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL
        R  PP+LPSLLL  RI Y+GMP VPAVTEL++A+ M+L + +P +P+YLYINS GT  +  ET+
Subjt:  RRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETL

AT4G17040.1 CLP protease R subunit 42.1e-1651.47Show/hide
Query:  RPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQS
        +PPP+L S L   RI+Y+GM  VP+VTEL++AE +YLQ+ D  +P+YLYINSTGTT++ ++   D ++
Subjt:  RPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCACCAGCTCAAGTCGAAAGATCAGTTTCCTACAATGAACATACGTCGAGGAGGCCGCCGCCGGAGTTGCCGTCTCTATTACTTCATGGAAGAATCATTTACAT
CGGAATGCCTTTTGTTCCAGCTGTCACAGAGCTAGTTATTGCTGAACTGATGTACCTGCAATGGATGGATCCAAGAGAACCAGTATATCTTTATATAAACTCCACAGGAA
CAACTCGAGATGCTGACGAAACTCTTCTTGATCCACAATCTGTGAAATTGGGCTGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCACCAGCTCAAGTCGAAAGATCAGTTTCCTACAATGAACATACGTCGAGGAGGCCGCCGCCGGAGTTGCCGTCTCTATTACTTCATGGAAGAATCATTTACAT
CGGAATGCCTTTTGTTCCAGCTGTCACAGAGCTAGTTATTGCTGAACTGATGTACCTGCAATGGATGGATCCAAGAGAACCAGTATATCTTTATATAAACTCCACAGGAA
CAACTCGAGATGCTGACGAAACTCTTCTTGATCCACAATCTGTGAAATTGGGCTGGGTTTGATGCTGCTCGTGACGTTCTTATTCGTGCAAAAGAGGTCAAGATCCTTCT
ATAGCCTGGTAATTTATTTTGAAGTAGAACTCAGTTTCTTTGACTCTGATTTTTGCTGGTGTTGAGGATTGTTCGGTGGGAGTCCCACATTGGCTAATTTAGGG
Protein sequenceShow/hide protein sequence
MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV