; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23299 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23299
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionABC transporter G family member 25-like
Genome locationCarg_Chr09:6611249..6616738
RNA-Seq ExpressionCarg23299
SyntenyCarg23299
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592195.1 ABC transporter G family member 25, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2691.89Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     T LETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

KAG7025050.1 ABC transporter G family member 25, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-61100Show/hide
Query:  MKQTLITSYNTLLAPRVKAATLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGIFGFETHQIDSLNEGEACIACIRQERSMVT
        MKQTLITSYNTLLAPRVKAATLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGIFGFETHQIDSLNEGEACIACIRQERSMVT
Subjt:  MKQTLITSYNTLLAPRVKAATLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGIFGFETHQIDSLNEGEACIACIRQERSMVT

Query:  KLRCCCIRAFEPATINRFRIL
        KLRCCCIRAFEPATINRFRIL
Subjt:  KLRCCCIRAFEPATINRFRIL

XP_022936361.1 ABC transporter G family member 25-like [Cucurbita moschata]1.8e-2590.54Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     TLLETKTRERLTCKTSL MWCNQLSILLQRNLKERKHETFNGLR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

XP_022976378.1 ABC transporter G family member 25-like [Cucurbita maxima]3.3e-2489.19Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     TLLETKTRERLT KTSL MWCNQLSILLQRNLKERKHETFNGLR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

XP_023535221.1 ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo]1.8e-2590.54Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     TLLETKTRERLTCKTSL MWCNQLSILLQRNLKERKHETFNGLR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

TrEMBL top hitse value%identityAlignment
A0A0A0K4U8 ABC transporter domain-containing protein5.0e-1873.08Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERL----TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA      +LET TRE+     T K S+ +WCNQLSILLQRNLKERKHETFN LR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERL----TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

A0A6J1EED9 ABC transporter G family member 25-like3.8e-1871.43Show/hide
Query:  MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        +KQTLITSYNTLLAPRVKAA  +ET T+E +        TCKTSL +WC QL+ILLQRNLKERKHETFN LR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

A0A6J1F797 ABC transporter G family member 25-like8.5e-2690.54Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     TLLETKTRERLTCKTSL MWCNQLSILLQRNLKERKHETFNGLR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

A0A6J1ILY7 ABC transporter G family member 25-like1.6e-2489.19Show/hide
Query:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        MKQTLITSYNTLLAPRVKAA     TLLETKTRERLT KTSL MWCNQLSILLQRNLKERKHETFNGLR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

A0A6J1J1S9 ABC transporter G family member 25-like1.7e-1872.73Show/hide
Query:  MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        +KQTLITSYNTLLAPRVKAA  +ET T+E +        TCKTSL +WC QLSILLQRNLKERKHETFN LR FQVI
Subjt:  MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

SwissProt top hitse value%identityAlignment
Q7XA72 ABC transporter G family member 211.6e-0541.03Show/hide
Query:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI
        +KQ+LI+SY   L P +K   + T  + +T  RL  K         W  Q S+LL+R LKER HE+F+GLR F V+ +
Subjt:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI

Q84TH5 ABC transporter G family member 256.5e-0744.3Show/hide
Query:  MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        ++QTL+T+Y+TLLAP+VK    +           KTR       T +  W +QL ILL R LKER+HE+F+ LR FQV+
Subjt:  MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

Arabidopsis top hitse value%identityAlignment
AT1G31770.1 ATP-binding cassette 144.1e-0432.91Show/hide
Query:  MKQTLITSYNTLLAPRVKAATL-LETKTRE-------RLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI
        +K+TL+++Y   ++ ++KA     E+ + E        L  +     W  Q ++LLQR ++ER+ E+FN LR FQVI +
Subjt:  MKQTLITSYNTLLAPRVKAATL-LETKTRE-------RLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI

AT1G71960.1 ATP-binding casette family G254.6e-0844.3Show/hide
Query:  MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI
        ++QTL+T+Y+TLLAP+VK    +           KTR       T +  W +QL ILL R LKER+HE+F+ LR FQV+
Subjt:  MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVI

AT3G25620.1 ABC-2 type transporter family protein1.1e-0641.03Show/hide
Query:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI
        +KQ+LI+SY   L P +K   + T  + +T  RL  K         W  Q S+LL+R LKER HE+F+GLR F V+ +
Subjt:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI

AT3G25620.2 ABC-2 type transporter family protein1.1e-0641.03Show/hide
Query:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI
        +KQ+LI+SY   L P +K   + T  + +T  RL  K         W  Q S+LL+R LKER HE+F+GLR F V+ +
Subjt:  MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLKERKHETFNGLRFFQVIGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCT
CTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATTGGCATATTTGGCT
TTGAGACGCATCAAATAGATAGCCTAAATGAAGGAGAAGCTTGCATTGCATGCATTAGACAAGAAAGATCTATGGTCACCAAACTTCGATGCTGTTGCATTCGAGCATTC
GAACCTGCAACGATCAACCGTTTCAGGATACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCT
CTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATTGGCATATTTGGCT
TTGAGACGCATCAAATAGATAGCCTAAATGAAGGAGAAGCTTGCATTGCATGCATTAGACAAGAAAGATCTATGGTCACCAAACTTCGATGCTGTTGCATTCGAGCATTC
GAACCTGCAACGATCAACCGTTTCAGGATACTATAA
Protein sequenceShow/hide protein sequence
MKQTLITSYNTLLAPRVKAATLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGIFGFETHQIDSLNEGEACIACIRQERSMVTKLRCCCIRAF
EPATINRFRIL