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Carg23300 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23300
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionABC transporter G family member 25-like
Genome locationCarg_Chr09:6616525..6620606
RNA-Seq ExpressionCarg23300
SyntenyCarg23300
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592195.1 ABC transporter G family member 25, partial [Cucurbita argyrosperma subsp. sororia]4.7e-3598.72Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

KAG7025051.1 hypothetical protein SDJN02_13874 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-36100Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV
        MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV

XP_022936361.1 ABC transporter G family member 25-like [Cucurbita moschata]4.0e-3497.44Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAP VQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

XP_022976378.1 ABC transporter G family member 25-like [Cucurbita maxima]1.6e-3092.31Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPS SS RPLTLKFVDVSYRVKVTNKSGNTIGRIF CGS DGAAP VQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

XP_023535221.1 ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo]4.7e-3598.72Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

TrEMBL top hitse value%identityAlignment
A0A0A0K4U8 ABC transporter domain-containing protein2.2e-2275.31Show/hide
Query:  MPSFVGGAQAKDVSSLHLPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFV   Q KD SSLHLPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRI GCGS DG+ PPVQERSILHGV+GMV+
Subjt:  MPSFVGGAQAKDVSSLHLPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

A0A1S3CGA3 ABC transporter G family member 25 isoform X11.2e-2074.39Show/hide
Query:  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFV   Q KD SSLH LPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRIFGC S DG+ PPVQERSILHGV+GMV+
Subjt:  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

A0A5A7TVI3 ABC transporter G family member 25 isoform X11.2e-2074.39Show/hide
Query:  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFV   Q KD SSLH LPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRIFGC S DG+ PPVQERSILHGV+GMV+
Subjt:  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

A0A6J1F797 ABC transporter G family member 25-like1.9e-3497.44Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAP VQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

A0A6J1ILY7 ABC transporter G family member 25-like7.6e-3192.31Show/hide
Query:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA
        MPSFVGGAQAKDVSSLHLPS SS RPLTLKFVDVSYRVKVTNKSGNTIGRIF CGS DGAAP VQERSILHGVSGMV+
Subjt:  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA

SwissProt top hitse value%identityAlignment
Q84TH5 ABC transporter G family member 251.2e-0444.26Show/hide
Query:  SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMVA
        SSSC P+TLKFVDV YRVK+   S ++  I ++ G            +ER+IL GV+GM++
Subjt:  SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMVA

Arabidopsis top hitse value%identityAlignment
AT1G71960.1 ATP-binding casette family G258.3e-0644.26Show/hide
Query:  SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMVA
        SSSC P+TLKFVDV YRVK+   S ++  I ++ G            +ER+IL GV+GM++
Subjt:  SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGTTTGTAGATGTGAGTTATCG
AGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTT
CTGGGATGGTGGCGACGGTCTAA
mRNA sequenceShow/hide mRNA sequence
CTTTATATAGTTCCCCAAAAAATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAA
GTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAAC
GGAGTATTCTTCATGGGGTTTCTGGGATGGTGGCGACGGTCTAACCGGGTTAGTGTTGGCTAACGGTCAAAAGCTTTCCAAATCGATACTCCGATGGACCGGGTTCGTGA
CACAGGACGACGTCCTCTACCCACACTTAACTGTCCGAGAAACTCTCATATTCTGCTCTCTCCTCCGACTACCTCTTTCCCTCTCAAAGCAAGACAAAGTCGCAGTGGCC
GAGTCAGTGATCGTCGAGCTCGGGCTAACGAAATGCCAAAACACAATCATCGGAAACGCCTTCATCCGTGGCGTCTCGGGTGGAGAACGAAAAAGAGTGAGCATAGGCCA
CGAGATGCTCATAAACCCAAGCCTACTAATTCTCGACGAGCCGACATCAGGGCTAGACTCAACCGCAGCGCACCGGCTGGTGACCACCATGGCTGCGCTGGCTCACAAGG
GGAAGACCATAGTGACCTCAATTCACCAACCATCGAGCCGGGTGTACCAAACCTTTGACAAGGTGCTGGTGCTGTCGGAAGGGCGATGCTTGTATTATGGGAAAGAACCC
AGCTGATTTTCTCCTCGATCTCGCCAATGGTGTATACCAAGTTGAAAATACAAGTGAAGGAGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTT
TGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAG
AGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGG
Protein sequenceShow/hide protein sequence
MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV