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Carg23313 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23313
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein GIGANTEA-like isoform X1
Genome locationCarg_Chr06:10577588..10578412
RNA-Seq ExpressionCarg23313
SyntenyCarg23313
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009409 - response to cold (biological process)
GO:0009637 - response to blue light (biological process)
GO:0010218 - response to far red light (biological process)
GO:0010378 - temperature compensation of the circadian clock (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026211 - GIGANTEA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592205.1 Protein GIGANTEA, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4698.9Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
KAG7029182.1 Protein GIGANTEA, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-48100Show/hide
Query:  MDKNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        MDKNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  MDKNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
XP_022935847.1 protein GIGANTEA-like isoform X2 [Cucurbita moschata]5.3e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
XP_022935848.1 protein GIGANTEA-like isoform X3 [Cucurbita moschata]5.3e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
XP_022935850.1 protein GIGANTEA-like isoform X5 [Cucurbita moschata]1.8e-4698.9Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
TrEMBL top hitse value%identityAlignment
A0A6J1F5V5 protein GIGANTEA-like isoform X12.6e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
A0A6J1F6L3 protein GIGANTEA-like isoform X42.6e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
A0A6J1F6R0 protein GIGANTEA-like isoform X22.6e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
A0A6J1FBN3 protein GIGANTEA-like isoform X32.6e-4697.8Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +NHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
A0A6J1FBU6 protein GIGANTEA-like isoform X58.8e-4798.9Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVAT+RDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
SwissProt top hitse value%identityAlignment
Q9AWL7 Protein GIGANTEA6.3e-2660.87Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPL-QHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +  YSEQWALACGEILR+LTHYNRPI+K + ++ E E S++   A+S ++ +      P  + +RKP+RPLSPWITDILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPL-QHERKPIRPLSPWITDILLAAPLGIRSDYFR
Q9SQI2 Protein GIGANTEA9.1e-3372.53Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +N YSEQWALACGEILRILTHYNRPIYKTEQ+NG+TER+      TS           P QHERKP+RPLSPWI+DILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
Arabidopsis top hitse value%identityAlignment
AT1G22770.1 gigantea protein (GI)6.4e-3472.53Show/hide
Query:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR
        +N YSEQWALACGEILRILTHYNRPIYKTEQ+NG+TER+      TS           P QHERKP+RPLSPWI+DILLAAPLGIRSDYFR
Subjt:  KNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGAACCATTATTCTGAACAATGGGCCCTTGCATGTGGGGAGATACTCCGGATCTTGACTCATTACAATCGGCCAATATACAAGACGGAACAAAAGAATGGTGA
AACAGAAAGAAGCAATAGTGGCTGCGTTGCTACGTCTCGTGACACCAATGATGGGGAATTTGTTCAAGTGCCTCTGCAACACGAGAGGAAACCTATAAGACCTTTGTCCC
CATGGATTACTGACATATTGCTTGCTGCACCATTGGGCATCAGAAGCGACTATTTCCGC
mRNA sequenceShow/hide mRNA sequence
TAAACGCCGTGCCATGAAGTTCATAAGCTGGTGGATATCATGTATATTCCATTTCATTTCTTCCATGGAGTCATCGCACGGTTGGTCAATGTTCGTGGGATGGGACAGGG
GTTGCTCCACCAATGGATAAGAACCATTATTCTGAACAATGGGCCCTTGCATGTGGGGAGATACTCCGGATCTTGACTCATTACAATCGGCCAATATACAAGACGGAACA
AAAGAATGGTGAAACAGAAAGAAGCAATAGTGGCTGCGTTGCTACGTCTCGTGACACCAATGATGGGGAATTTGTTCAAGTGCCTCTGCAACACGAGAGGAAACCTATAA
GACCTTTGTCCCCATGGATTACTGACATATTGCTTGCTGCACCATTGGGCATCAGAAGCGACTATTTCCGC
Protein sequenceShow/hide protein sequence
MDKNHYSEQWALACGEILRILTHYNRPIYKTEQKNGETERSNSGCVATSRDTNDGEFVQVPLQHERKPIRPLSPWITDILLAAPLGIRSDYFR