; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23337 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23337
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCCR4-NOT transcription complex subunit 3
Genome locationCarg_Chr06:10415741..10422556
RNA-Seq ExpressionCarg23337
SyntenyCarg23337
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR007207 - CCR4-Not complex component, Not N-terminal domain
IPR040168 - Not2/Not3/Not5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597710.1 CCR4-NOT transcription complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia]1.0e-10992.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

KAG7029158.1 CCR4-NOT transcription complex subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-123100Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

XP_022932652.1 CCR4-NOT transcription complex subunit 3-like isoform X1 [Cucurbita moschata]1.0e-10992.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

XP_022972241.1 CCR4-NOT transcription complex subunit 3-like isoform X2 [Cucurbita maxima]1.0e-10992.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

XP_023540755.1 CCR4-NOT transcription complex subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo]1.0e-10992.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

TrEMBL top hitse value%identityAlignment
A0A5A7UAP5 General negative regulator of transcription subunit 33.2e-10689.32Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNN+VSELESQIDNFEAE+EGLSVKKGK+RPPRL+HLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELS E VNDV++FLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

A0A6J1EWX6 CCR4-NOT transcription complex subunit 3-like isoform X24.8e-11092.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

A0A6J1F2R9 CCR4-NOT transcription complex subunit 3-like isoform X14.8e-11092.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

A0A6J1I5G5 CCR4-NOT transcription complex subunit 3-like isoform X24.8e-11092.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

A0A6J1I9B4 CCR4-NOT transcription complex subunit 3-like isoform X14.8e-11092.74Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

SwissProt top hitse value%identityAlignment
O13870 General negative regulator of transcription subunit 37.6e-4447.26Show/hide
Query:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICE
        ++RKLQ EI++  KKV +G+ +FD ++ K+  +++ +QKEK E DLK +IKKLQR RDQIKTW  S++IKDKK       ALL+ R+LIE +ME FK  E
Subjt:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICE

Query:  KETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGL--SVKKGKSRPPRLIH---LETSITRHKA
        +E K KAFSKEGL    K                  DPKEK K +T  W++N V ELE Q +  EAE E L  + K+GK    +L H   LE+ I RHK 
Subjt:  KETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGL--SVKKGKSRPPRLIH---LETSITRHKA

Query:  HIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        H  KLELI+R L+N ++S E VND++E +  YVE +Q
Subjt:  HIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

O75175 CCR4-NOT transcription complex subunit 32.6e-5249.79Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        M   RKLQGEIDR LKKV EGV+ F+ IW K+++  N+NQKEK+EADLKKEIKKLQR RDQIKTW+ S+EIKDK+        L+D RKLIE +MERFK+
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSV----KKG-KSRPPRLIHLETSITRH
         E+ETKTKA+SKEGLG   K                  DP +K K E   WL N +  L  Q+D FE+E+E LSV    KKG K +  R+  L+  I +H
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSV----KKG-KSRPPRLIHLETSITRH

Query:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        + H+  LE ILR+LDND +  + +  +++ +E YV+ +Q
Subjt:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

P06102 General negative regulator of transcription subunit 37.3e-3136.4Show/hide
Query:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYD-TDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKIC
        A RKLQ E+DRV KK+ EG+++F+S + +    T+N +QK+K E+DLK+E+KKLQR R+QIK+W  S +IKDK        +LLD R+ +E  ME++K  
Subjt:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYD-TDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKIC

Query:  EKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETS------ITRH
        EK +K KA+S   L                  K +  DP+E+ + +  ++L+ ++ ELE Q D+ + E++ L +   K +     + E          R+
Subjt:  EKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETS------ITRH

Query:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        + H  ++EL LRLL N+EL  +DV +V++ +  +VE NQ
Subjt:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

Q12514 General negative regulator of transcription subunit 54.6e-3339.91Show/hide
Query:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTD--NSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        + RKLQ +ID++LKKV+EG++ FD I+ K   TD  NS+ +EK E+DLK+EIKKLQ++RDQIKTW+   ++KDK      +  L+  R+LIE  MERFK 
Subjt:  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTD--NSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
         EK  KTK FSKE L            T+  I+K    DPKE  K +   ++++ + EL+ Q++ +EA+                   E    RH+ HI 
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERN
         LE IL+ L N+E+  E V + ++ ++ YVE N
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERN

Q8K0V4 CCR4-NOT transcription complex subunit 37.5e-5249.37Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        M   RKLQGEIDR LKKV EGV+ F+ IW K+++  N+NQKEK+EADLKKEIKKLQR RDQIKTW+ S+EIKDK+        L++ RKLIE +MERFK+
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSV----KKG-KSRPPRLIHLETSITRH
         E+ETKTKA+SKEGLG   K                  DP +K K E   WL N +  L  Q+D FE+E+E LSV    KKG K +  R+  L+  I +H
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSV----KKG-KSRPPRLIHLETSITRH

Query:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        + H+  LE ILR+LDND +  + +  +++ +E YV+ +Q
Subjt:  KAHIMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

Arabidopsis top hitse value%identityAlignment
AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein9.3e-10685.9Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDN NQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQ+L+DARKLIE+EMERFKI
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKI

Query:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM
        CEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNN+VSELESQID+FEAE+EGLSVKKGK+RPPRL HLETSITRHK HI+
Subjt:  CEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIM

Query:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        KLELILRLLDNDELS E VNDV++FL+DYVERNQ
Subjt:  KLELILRLLDNDELSHEDVNDVREFLEDYVERNQ

AT5G18230.2 transcription regulator NOT2/NOT3/NOT5 family protein3.0e-10485.17Show/hide
Query:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNK--VYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERF
        MGASRKLQGEIDRVLKKVQEGVDVFDSIWNK  VYDTDN NQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQ+L+DARKLIE+EMERF
Subjt:  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNK--VYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERF

Query:  KICEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAH
        KICEKETKTKAFSKEGLGQQPKT                 DPKEKAKSETRDWLNN+VSELESQID+FEAE+EGLSVKKGK+RPPRL HLETSITRHK H
Subjt:  KICEKETKTKAFSKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAH

Query:  IMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ
        I+KLELILRLLDNDELS E VNDV++FL+DYVERNQ
Subjt:  IMKLELILRLLDNDELSHEDVNDVREFLEDYVERNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCGAGTCGAAAGCTTCAAGGGGAGATTGACCGAGTTCTTAAGAAGGTCCAAGAAGGGGTTGACGTCTTTGACAGCATTTGGAACAAGGTTTATGATACCGACAA
TTCCAATCAGAAGGAGAAGTTCGAGGCGGATTTGAAGAAGGAGATAAAGAAGCTTCAGAGGTACAGGGACCAAATTAAGACCTGGATTCAGTCCAGTGAGATTAAGGACA
AGAAGGTCAGTGCCTCTTATGAGCAGGCTTTGTTGGATGCTCGTAAACTTATTGAGCGTGAAATGGAAAGATTTAAGATTTGTGAAAAGGAGACGAAAACCAAAGCCTTC
TCGAAAGAAGGTTTGGGTCAACAGCCTAAAACTATAATGGAAGGCAGGATCACGTCTTCCTTCATTGTCAAAATACAATGGAGCGACCCAAAGGAGAAAGCTAAATCAGA
GACACGAGATTGGTTGAACAATTTGGTTAGTGAGTTGGAATCTCAGATTGATAATTTTGAAGCTGAAATGGAGGGTCTATCTGTGAAGAAGGGAAAATCAAGGCCACCTA
GATTGATTCATCTGGAAACTTCTATTACTCGGCACAAGGCTCATATAATGAAGCTGGAACTAATCTTGAGACTGCTTGATAATGATGAATTGAGTCATGAGGATGTCAAT
GATGTCAGGGAGTTTTTAGAAGACTATGTGGAAAGGAATCAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCGAGTCGAAAGCTTCAAGGGGAGATTGACCGAGTTCTTAAGAAGGTCCAAGAAGGGGTTGACGTCTTTGACAGCATTTGGAACAAGGTTTATGATACCGACAA
TTCCAATCAGAAGGAGAAGTTCGAGGCGGATTTGAAGAAGGAGATAAAGAAGCTTCAGAGGTACAGGGACCAAATTAAGACCTGGATTCAGTCCAGTGAGATTAAGGACA
AGAAGGTCAGTGCCTCTTATGAGCAGGCTTTGTTGGATGCTCGTAAACTTATTGAGCGTGAAATGGAAAGATTTAAGATTTGTGAAAAGGAGACGAAAACCAAAGCCTTC
TCGAAAGAAGGTTTGGGTCAACAGCCTAAAACTATAATGGAAGGCAGGATCACGTCTTCCTTCATTGTCAAAATACAATGGAGCGACCCAAAGGAGAAAGCTAAATCAGA
GACACGAGATTGGTTGAACAATTTGGTTAGTGAGTTGGAATCTCAGATTGATAATTTTGAAGCTGAAATGGAGGGTCTATCTGTGAAGAAGGGAAAATCAAGGCCACCTA
GATTGATTCATCTGGAAACTTCTATTACTCGGCACAAGGCTCATATAATGAAGCTGGAACTAATCTTGAGACTGCTTGATAATGATGAATTGAGTCATGAGGATGTCAAT
GATGTCAGGGAGTTTTTAGAAGACTATGTGGAAAGGAATCAG
Protein sequenceShow/hide protein sequence
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAF
SKEGLGQQPKTIMEGRITSSFIVKIQWSDPKEKAKSETRDWLNNLVSELESQIDNFEAEMEGLSVKKGKSRPPRLIHLETSITRHKAHIMKLELILRLLDNDELSHEDVN
DVREFLEDYVERNQ