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Carg23366 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23366
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGPI-anchored protein LLG1-like
Genome locationCarg_Chr01:8871508..8872575
RNA-Seq ExpressionCarg23366
SyntenyCarg23366
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039307 - GPI-anchored protein LORELEI-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607719.1 GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia]7.6e-6380.98Show/hide
Query:  FFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI
        F C+ FL  L      +DSTFIS                   ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI
Subjt:  FFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI

Query:  NLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        NLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
Subjt:  NLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

KAG7037291.1 GPI-anchored protein LLG1 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-79100Show/hide
Query:  MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSI
        MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSI
Subjt:  MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSI

Query:  CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
Subjt:  CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

XP_022941474.1 GPI-anchored protein LLG1-like isoform X2 [Cucurbita moschata]4.0e-6499.17Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR
        ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGL CPQLPAPSHPNSTPLSKCR
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR

Query:  SPAIIVASGLVLLFSWPFFML
        SPAIIVASGLVLLFSWPFFML
Subjt:  SPAIIVASGLVLLFSWPFFML

XP_022981629.1 GPI-anchored protein LLG1-like isoform X2 [Cucurbita maxima]2.0e-7185.12Show/hide
Query:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST
        MGSD+FFCS FLFFLFFVVSSADSTFIS                   ACPVSFEFLNYTI+TSKCKGPLYSPELCCSALTEL CPYVD MNDMTTVCAST
Subjt:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST

Query:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFF L
Subjt:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

XP_023525700.1 GPI-anchored protein LLG1-like isoform X2 [Cucurbita pepo subsp. pepo]1.5e-7185.12Show/hide
Query:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST
        MGSDRFFCSFFLFFLFFVVSSA STFIS                   ACPVSFEFLNYTIITSKCKGPLYSP+LCCSALTELSCPYVDVMNDMTT+CAST
Subjt:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST

Query:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSK  SPAIIVASGLVLLFSWPFF L
Subjt:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

TrEMBL top hitse value%identityAlignment
A0A6J1FNF9 GPI-anchored protein LLG1-like isoform X22.0e-6499.17Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR
        ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGL CPQLPAPSHPNSTPLSKCR
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR

Query:  SPAIIVASGLVLLFSWPFFML
        SPAIIVASGLVLLFSWPFFML
Subjt:  SPAIIVASGLVLLFSWPFFML

A0A6J1FS74 GPI-anchored protein LLG1-like isoform X11.1e-6280.37Show/hide
Query:  FFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI
        F C+ FL  L      +DSTFIS                   ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI
Subjt:  FFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYI

Query:  NLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        NLHGKYPPGLFSSICREGDQGL CPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
Subjt:  NLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

A0A6J1IX37 GPI-anchored protein LLG1-like isoform X45.3e-6283.89Show/hide
Query:  MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSI
        MGS  F   F L +  F  +   +  +SACPVSFEFLNYTI+TSKCKGPLYSPELCCSALTEL CPYVD MNDMTTVCASTMFSYINLHGKYPPGLFSSI
Subjt:  MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSI

Query:  CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFF L
Subjt:  CREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

A0A6J1J022 GPI-anchored protein LLG1-like isoform X31.8e-6296.69Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR
        ACPVSFEFLNYTI+TSKCKGPLYSPELCCSALTEL CPYVD MNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCR

Query:  SPAIIVASGLVLLFSWPFFML
        SPAIIVASGLVLLFSWPFF L
Subjt:  SPAIIVASGLVLLFSWPFFML

A0A6J1J2D9 GPI-anchored protein LLG1-like isoform X29.7e-7285.12Show/hide
Query:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST
        MGSD+FFCS FLFFLFFVVSSADSTFIS                   ACPVSFEFLNYTI+TSKCKGPLYSPELCCSALTEL CPYVD MNDMTTVCAST
Subjt:  MGSDRFFCSFFLFFLFFVVSSADSTFIS-------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCAST

Query:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML
        MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFF L
Subjt:  MFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML

SwissProt top hitse value%identityAlignment
B3GS44 GPI-anchored protein LORELEI3.2e-2447.06Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSH------PNSTP
        C V+FE+++Y ++T +CKGP +  + CCSA  E +CPYV  +NDM + CA TMFSY+N++G YP GLF++ CRE   GL CP  P  SH       +STP
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSH------PNSTP

Query:  --LSKCRSPAIIVASGLVL
          +S   S A  V + LVL
Subjt:  --LSKCRSPAIIVASGLVL

Q6NLF4 GPI-anchored protein LLG28.5e-2545.22Show/hide
Query:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL--PAPSHPNSTPLS
        + C   F   NYTIITS+CKGP Y   +CCSA  + +CP+ +V+ND    CASTMFSYINL+G+YPPG+F+++C+EG +GL C  +   A +  +S P +
Subjt:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL--PAPSHPNSTPLS

Query:  KCRSPAIIVASGLVL
           +   ++++ LVL
Subjt:  KCRSPAIIVASGLVL

Q9FKT1 GPI-anchored protein LLG18.8e-3044.94Show/hide
Query:  SFFLFFLFFVVSS-ADSTFIS--------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYIN
        + F F L  V+SS + S+FIS                     CPV+FEF+NYTIITSKCKGP Y P+ CC A  + +CPY D +ND+++ CA+TMFSYIN
Subjt:  SFFLFFLFFVVSS-ADSTFIS--------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYIN

Query:  LHGKYPPGLFSSICREGDQGLACP---QLPAPSHPNSTPLSKCRSPAIIVASGLVLLF
        L+GKYPPGLF++ C+EG +GL CP   QLP  +       +   S   +  S  +L+F
Subjt:  LHGKYPPGLFSSICREGDQGLACP---QLPAPSHPNSTPLSKCRSPAIIVASGLVLLF

Q9M0I0 GPI-anchored protein LLG35.9e-2654.08Show/hide
Query:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL
        + C   F   NYTIITSKCKGP Y  ++CCSA  + +CP+ +V+ND  T CASTMFSYINL+G+YPPG+F+++C+EG +GL C  + P  S   S PL
Subjt:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL

Arabidopsis top hitse value%identityAlignment
AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 26.1e-2645.22Show/hide
Query:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL--PAPSHPNSTPLS
        + C   F   NYTIITS+CKGP Y   +CCSA  + +CP+ +V+ND    CASTMFSYINL+G+YPPG+F+++C+EG +GL C  +   A +  +S P +
Subjt:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL--PAPSHPNSTPLS

Query:  KCRSPAIIVASGLVL
           +   ++++ LVL
Subjt:  KCRSPAIIVASGLVL

AT4G26466.1 lorelei2.3e-2547.06Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSH------PNSTP
        C V+FE+++Y ++T +CKGP +  + CCSA  E +CPYV  +NDM + CA TMFSY+N++G YP GLF++ CRE   GL CP  P  SH       +STP
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQLPAPSH------PNSTP

Query:  --LSKCRSPAIIVASGLVL
          +S   S A  V + LVL
Subjt:  --LSKCRSPAIIVASGLVL

AT4G28280.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 31.1e-2754.55Show/hide
Query:  ISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL
        ++AC   F   NYTIITSKCKGP Y  ++CCSA  + +CP+ +V+ND  T CASTMFSYINL+G+YPPG+F+++C+EG +GL C  + P  S   S PL
Subjt:  ISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL

AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 34.2e-2754.08Show/hide
Query:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL
        + C   F   NYTIITSKCKGP Y  ++CCSA  + +CP+ +V+ND  T CASTMFSYINL+G+YPPG+F+++C+EG +GL C  + P  S   S PL
Subjt:  SACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLACPQL-PAPSHPNSTPL

AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 16.3e-3144.94Show/hide
Query:  SFFLFFLFFVVSS-ADSTFIS--------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYIN
        + F F L  V+SS + S+FIS                     CPV+FEF+NYTIITSKCKGP Y P+ CC A  + +CPY D +ND+++ CA+TMFSYIN
Subjt:  SFFLFFLFFVVSS-ADSTFIS--------------------ACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYIN

Query:  LHGKYPPGLFSSICREGDQGLACP---QLPAPSHPNSTPLSKCRSPAIIVASGLVLLF
        L+GKYPPGLF++ C+EG +GL CP   QLP  +       +   S   +  S  +L+F
Subjt:  LHGKYPPGLFSSICREGDQGLACP---QLPAPSHPNSTPLSKCRSPAIIVASGLVLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTGATAGGTTCTTTTGCTCCTTCTTTCTGTTTTTCCTCTTCTTTGTTGTTTCCTCTGCAGATTCAACCTTCATATCAGCTTGCCCTGTGAGCTTTGAATTTTT
GAACTACACAATCATCACAAGCAAATGCAAGGGGCCTTTATATTCTCCAGAGCTATGTTGTTCAGCTCTAACAGAACTTTCTTGCCCTTATGTTGATGTCATGAATGATA
TGACAACTGTTTGTGCTTCAACCATGTTTAGCTACATTAACCTCCATGGAAAGTACCCACCTGGCCTTTTCTCCAGCATATGTCGAGAAGGAGATCAAGGTCTTGCTTGC
CCTCAATTGCCAGCTCCATCCCATCCAAACTCGACCCCGCTCTCAAAATGTCGATCTCCTGCAATCATCGTTGCCTCTGGACTTGTACTTCTCTTCTCATGGCCTTTTTT
TATGCTCTGA
mRNA sequenceShow/hide mRNA sequence
TGAGAAAACAGAAATGAGTGAAGAACACTGAACTAACATTTTGATTCAATTCCCTGAGTTTGAACACAGTGATCTCTCCAGCTCCAAAGCTGAATAATCTCTCATAGATT
ATGGGTTCTGATAGGTTCTTTTGCTCCTTCTTTCTGTTTTTCCTCTTCTTTGTTGTTTCCTCTGCAGATTCAACCTTCATATCAGCTTGCCCTGTGAGCTTTGAATTTTT
GAACTACACAATCATCACAAGCAAATGCAAGGGGCCTTTATATTCTCCAGAGCTATGTTGTTCAGCTCTAACAGAACTTTCTTGCCCTTATGTTGATGTCATGAATGATA
TGACAACTGTTTGTGCTTCAACCATGTTTAGCTACATTAACCTCCATGGAAAGTACCCACCTGGCCTTTTCTCCAGCATATGTCGAGAAGGAGATCAAGGTCTTGCTTGC
CCTCAATTGCCAGCTCCATCCCATCCAAACTCGACCCCGCTCTCAAAATGTCGATCTCCTGCAATCATCGTTGCCTCTGGACTTGTACTTCTCTTCTCATGGCCTTTTTT
TATGCTCTGA
Protein sequenceShow/hide protein sequence
MGSDRFFCSFFLFFLFFVVSSADSTFISACPVSFEFLNYTIITSKCKGPLYSPELCCSALTELSCPYVDVMNDMTTVCASTMFSYINLHGKYPPGLFSSICREGDQGLAC
PQLPAPSHPNSTPLSKCRSPAIIVASGLVLLFSWPFFML