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Carg23386 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23386
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionalpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like
Genome locationCarg_Chr06:3316624..3317678
RNA-Seq ExpressionCarg23386
SyntenyCarg23386
Gene Ontology termsGO:0005992 - trehalose biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596732.1 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2870.71Show/hide
Query:  FEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        FEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS           ++IG     S+ +   + +GN +P
Subjt:  FEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

KAG7028268.1 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-66100Show/hide
Query:  MVRKALIVRVLFSVSGVFEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQD
        MVRKALIVRVLFSVSGVFEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQD
Subjt:  MVRKALIVRVLFSVSGVFEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQD

Query:  PSINRPIALSLGNSVPDFGTIENGMDRLASF
        PSINRPIALSLGNSVPDFGTIENGMDRLASF
Subjt:  PSINRPIALSLGNSVPDFGTIENGMDRLASF

XP_022923374.1 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isoform X1 [Cucurbita moschata]7.2e-17100Show/hide
Query:  IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
Subjt:  IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

XP_023005288.1 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like [Cucurbita maxima]7.2e-1764.63Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS           ++IG     S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

XP_023540413.1 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like [Cucurbita pepo subsp. pepo]7.2e-1764.63Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS           ++IG     S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

TrEMBL top hitse value%identityAlignment
A0A6J1E682 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isoform X13.5e-17100Show/hide
Query:  IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
Subjt:  IMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

A0A6J1EBM1 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isoform X27.8e-17100Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

A0A6J1FI23 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like3.5e-1764.63Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS           ++IG     S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

A0A6J1L1R8 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like3.5e-1764.63Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS           ++IG     S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

A0A6J1L3D1 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like7.8e-17100Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

SwissProt top hitse value%identityAlignment
O23617 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 51.2e-0947.56Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLL+LASG         REKKR PRVATV GVLSELDDD+ +       P          S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP

Q94AH8 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 64.9e-0863.83Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        MVSRSYSNLLELASG  SPTF  GR  +++PR+  VAG++S +D+DS
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

Q9LMI0 Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 71.2e-0658.7Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDD
        M+SRSY+NLL+LASG       +GRE++RLPRV TV G +SE D+D
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDD

Arabidopsis top hitse value%identityAlignment
AT1G06410.1 trehalose-phosphatase/synthase 78.6e-0858.7Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDD
        M+SRSY+NLL+LASG       +GRE++RLPRV TV G +SE D+D
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDD

AT1G68020.1 UDP-Glycosyltransferase / trehalose-phosphatase family protein3.5e-0963.83Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        MVSRSYSNLLELASG  SPTF  GR  +++PR+  VAG++S +D+DS
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

AT1G68020.2 UDP-Glycosyltransferase / trehalose-phosphatase family protein3.5e-0963.83Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS
        MVSRSYSNLLELASG  SPTF  GR  +++PR+  VAG++S +D+DS
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDS

AT4G17770.1 trehalose phosphatase/synthase 58.3e-1147.56Show/hide
Query:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP
        MVSRSYSNLL+LASG         REKKR PRVATV GVLSELDDD+ +       P          S+ +   + +GN +P
Subjt:  MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGGAAAGCCTTGATTGTGAGGGTATTATTTTCTGTATCTGGCGTCTTTGAAGCACCCTGGTTTTCTTTTTGGGTTAAGTTTTTAGAAGATTTGATAATGGTTTC
GAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCT
TGTCTGAGCTTGATGATGATAGCCCTGCACCAGTTAAATTGGGCTCGATGCCCCGCCATGCCATCGGTCGCCTGCAAGACCCGAGTATTAACCGACCAATCGCATTATCG
TTAGGGAATTCAGTCCCCGACTTCGGCACTATCGAAAATGGAATGGACCGATTGGCGAGCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGGAAAGCCTTGATTGTGAGGGTATTATTTTCTGTATCTGGCGTCTTTGAAGCACCCTGGTTTTCTTTTTGGGTTAAGTTTTTAGAAGATTTGATAATGGTTTC
GAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCT
TGTCTGAGCTTGATGATGATAGCCCTGCACCAGTTAAATTGGGCTCGATGCCCCGCCATGCCATCGGTCGCCTGCAAGACCCGAGTATTAACCGACCAATCGCATTATCG
TTAGGGAATTCAGTCCCCGACTTCGGCACTATCGAAAATGGAATGGACCGATTGGCGAGCTTTTAG
Protein sequenceShow/hide protein sequence
MVRKALIVRVLFSVSGVFEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALS
LGNSVPDFGTIENGMDRLASF