CuGenDBv2

Gene ID	Carg23392
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Genome location	Carg_Chr06:3276669..3277361
RNA-Seq Expression	Carg23392
Synteny	Carg23392
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596728.1 hypothetical protein SDJN03_09908, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-118

99.57

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKCPKHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

KAG7028262.1 hypothetical protein SDJN02_09443, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-119

100

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_022924447.1 suppressor protein SRP40-like [Cucurbita moschata]

8.3e-117

98.7

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKC KHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADV SLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_023005527.1 vitellogenin-1-like [Cucurbita maxima]

7.8e-115

96.96

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDED+VWKCPKHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDS DCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRSRSVVVSDSSGRFV+PPVKA+
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_023540514.1 suppressor protein SRP40-like [Cucurbita pepo subsp. pepo]

1.1e-116

98.7

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCV-TTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSR
        MAFYGDEDDVWKCPKHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCV TTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCV-TTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA
        SLAAIPFLRSRSRLVSDS+DCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA
Subjt:  SLAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA

Query:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG
        KTWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6G5 Uncharacterized protein

6.0e-97

84.85

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRR GICPLCLRDRL+TLCPDCANVRPCNCC TT TTTTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA
        LAAIPFL  RSR V+DS +DCSSSGNSAR SSFWSIF+S+SK+  +D GR E A EI+FRRR KEVAEVEEAMRR LMIRSRSV V+DS GR VRPPVKA
Subjt:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA

Query:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG
        KTWYFPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1E664 uncharacterized protein LOC111430968

1.1e-101

87.88

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKCPKHPSKRRR GICPLCLRDRL+TLCPDCANVRPCNCC   TTTTTSSSSSSSSSFSRFSSAD+ASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA
        LAAIPFLRSRSR V+DS +DCSSSGNSARASSFWSIFRS++K+S  D GR E A E +F+RR KEVAEVEEAMRRTLMIRSRSV VSDSSGRFVR PVKA
Subjt:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA

Query:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG
        K WYFPSPIKAFRQSK+ KAVLTERSPLHRG
Subjt:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1E8Z1 suppressor protein SRP40-like

4.0e-117

98.7

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKC KHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADV SLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1HN71 uncharacterized protein LOC111465171

6.2e-102

87.88

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDDVWKCPKHPSKRRR GICPLCLRDRL++LCPDCANVRPCNCC   TTTTTSSSSSSSSSFSRFSSAD+ASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA
        LAAIPFLRSRSR V+DS +DCSSSGNSARASSFWSIFRS++K+S  D GR E A E +F+RR KEVAEVEEAMRRTLMIRSRSV VSDSSGRFVR PVKA
Subjt:  LAAIPFLRSRSRLVSDS-EDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKA

Query:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG
        K WYFPSPIKAFRQSK+SKAVLTERSPLHRG
Subjt:  KTWYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1KTD6 vitellogenin-1-like

3.8e-115

96.96

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Query:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
        MAFYGDED+VWKCPKHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK
        LAAIPFLRSRSRLVSDS DCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRSRSVVVSDSSGRFV+PPVKA+
Subjt:  LAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAK

Query:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG
        TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Subjt:  TWYFPSPIKAFRQSKISKAVLTERSPLHRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32690.1 unknown protein

2.8e-30

42.55

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Query:  DEDDVWKCPKHPSKR---RRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFS---SADVASLGSVGRLSNLIDGEPAFRRSR
        DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+C      + + SSSSSSSSFS F+   S +++ +GSVGR+++LI+ EPAFRRS+
Subjt:  DEDDVWKCPKHPSKR---RRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFS---SADVASLGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPV--
        S+ AIP    +   V DS      G S + SSFW IF         + G T+ A                      +M +SRSV V+   G F   PV  
Subjt:  SLAAIPFLRSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPV--

Query:  --KAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG
          K K W FPSPIK FRQS++SK +  +RSPL+RG
Subjt:  --KAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG

AT2G35200.1 unknown protein

1.1e-21

35.43

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Query:  VW-KCPKHPSK-RRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFL
        VW KC +H  +     G+CP CL +RL +LCPDCA+  PC+C   T   + SS      SF+R        +GSVGR++NLI+ EPAFRRS S+    F 
Subjt:  VW-KCPKHPSK-RRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFL

Query:  RSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAKTWYFPSP
         ++   + ++E     G   R    W +FR      G+    T+  A    ++      EV         + S + V S  +G           WYFPSP
Subjt:  RSRSRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAKTWYFPSP

Query:  IKAFRQSKISKAVLTERSPLHRG
        IK FRQS++SK +  +RSPL+RG
Subjt:  IKAFRQSKISKAVLTERSPLHRG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTCTATGGCGATGAAGACGACGTATGGAAATGTCCGAAACACCCTTCCAAACGGCGGAGGACCGGAATATGTCCTCTCTGCCTCCGTGACCGCCTCCTCACTCT
CTGCCCTGACTGCGCCAACGTACGTCCTTGCAACTGTTGTGTAACTACCACCACCACCACTACCTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCTCTCGCTTCTCCTCCG
CCGATGTTGCCTCTCTTGGATCCGTTGGCCGTCTCTCGAATCTGATTGACGGCGAGCCGGCCTTCCGCCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTCCGATCGAGA
TCGCGACTCGTTTCAGATTCGGAAGACTGTTCGTCGTCTGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAGGAGTAAGAGGAGCGGCCATGACAG
CGGAAGAACCGAGACAGCAGCGGAAATCGAATTCAGGCGGAGAGAGAAGGAGGTAGCGGAAGTTGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCAAGATCAGTTG
TGGTTTCCGATTCTAGCGGGAGATTCGTCCGGCCACCAGTGAAGGCTAAGACGTGGTACTTTCCGAGTCCGATCAAAGCTTTTCGGCAATCGAAGATTTCAAAGGCCGTT
CTCACGGAACGGTCTCCGTTACACAGAGGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSR
SRLVSDSEDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAV
LTERSPLHRG

Carg23392 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome