; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23395 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23395
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1-like isoform X2
Genome locationCarg_Chr06:3248566..3252107
RNA-Seq ExpressionCarg23395
SyntenyCarg23395
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596723.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]9.3e-14599.66Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQE
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPK GGGGGAAAAAAAASAPPEPQQRPKPEPAQE
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQE

KAG7028259.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-150100Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQERNLFT
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQERNLFT
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQERNLFT

XP_022924007.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]1.5e-14298.28Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        M VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

XP_022924074.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]5.6e-14298.62Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
        AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

XP_022924148.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]5.1e-14398.63Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

TrEMBL top hitse value%identityAlignment
A0A6J1E7P2 binding partner of ACD11 1-like isoform X17.2e-14398.28Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        M VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

A0A6J1E858 binding partner of ACD11 1-like isoform X22.7e-14298.62Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
        AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

A0A6J1EBK2 binding partner of ACD11 1-like isoform X32.5e-14398.63Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFA+VHLSESPKGGGGG   AAAAAASAPPEPQQRPKPEPAQ
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

A0A6J1KTA3 binding partner of ACD11 1-like isoform X23.7e-13996.89Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
        AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEE+EEEQRKKMVEDFAQVHLSESPKGG        AAAASAPPEPQQRPKPEPAQ
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

A0A6J1L2C1 binding partner of ACD11 1-like isoform X34.4e-14096.91Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ
        IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEE+EEEQRKKMVEDFAQVHLSESPKGG        AAAASAPPEPQQRPKPEPAQ
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQ

SwissProt top hitse value%identityAlignment
P87216 Protein vip19.7e-0425.68Show/hide
Query:  VKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAESAFR
        V V+N+S   +E+ I +FFSF G +  +  +   E +Q A + F+     +TA+LL  A +    + IT          A +     GA    AA    +
Subjt:  VKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAESAFR

Query:  KAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSL------VSDKVREVDQKFQVSEK
            ++S +L++G+ L    +  +   D+ + +SS          K  G  E   +G         V++K  EVD KF +S+K
Subjt:  KAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSL------VSDKVREVDQKFQVSEK

Q9LFD5 Binding partner of ACD11 12.4e-7160.08Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VR+VKV N+S GA+E DI EFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    AAP A    +   AES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
          +KAEDVVS MLAKGFILGKDAV  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+M
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK
        KNRY+LTG SW  GAF++VA+AAGEVGQKTKEKVE  +  Q    ++++ E ++ +H SE  K
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-9465Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAA-PPAPGAKEPGA
        M++ TVKVSNVSLGA++RD+ EFFSFSGDI YLE QSE+ER+++AYVTFKD+QGAETAVLLSGATIVD SV +++ P+Y+L PEA A+  P    K P A
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAA-PPAPGAKEPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGS
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+FDKKIGFT+KI+ GT +V +KVREVDQK+QVSEKTKSA A AE+ VS AGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGS

Query:  AIMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQ-----RPKPEPAQERN
        AIMKNRY+LTG +WVTGAF+KVAKAA EVGQK KEKV   EEE ++K+V++FA+VHLSESPK       A   +  S  PE ++      P+ +P Q+++
Subjt:  AIMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQ-----RPKPEPAQERN

AT5G16840.1 binding partner of acd11 11.7e-7260.08Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VR+VKV N+S GA+E DI EFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    AAP A    +   AES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
          +KAEDVVS MLAKGFILGKDAV  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+M
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK
        KNRY+LTG SW  GAF++VA+AAGEVGQKTKEKVE  +  Q    ++++ E ++ +H SE  K
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK

AT5G16840.2 binding partner of acd11 19.1e-7460.08Show/hide
Query:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES
        VR+VKV N+S GA+E DI EFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    AAP A    +   AES
Subjt:  VRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAES

Query:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM
          +KAEDVVS MLAKGFILGKDAV  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+M
Subjt:  AFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIM

Query:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK
        KNRY+LTG SW  GAF++VA+AAGEVGQKTKEKVE  +  Q    ++++ E ++ +H SE  K
Subjt:  KNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK

AT5G16840.3 binding partner of acd11 14.5e-7360Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        M+VR+VKV N+S GA+E DI EFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    AAP A    +   A
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA
        ES  +KAEDVVS MLAKGFILGKDAV  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSA

Query:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK
        +MKNRY+LTG SW  GAF++VA+AAGEVGQKTKEKVE  +  Q    ++++ E ++ +H SE  K
Subjt:  IMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKVEETEEEQ----RKKMVEDFAQVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-8762.37Show/hide
Query:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA
        MS+ TVKVSNVSL A+ERD+ EFFSFSGDI YLE QSE++ S++AYVTFKD+QGAETAVLL+G+TIVD SV +T+ P+Y+LPP+A A+  +       ++
Subjt:  MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAA

Query:  E-----SAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS
              S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V +FDK+IGFTEKI+ GT++VS+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  E-----SAFRKAEDVVSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  TAGSAIMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKV--EETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPE
         AGSAIMKNRY+LTG +WVTGAF++V+KAA EVGQK KEKV   E EEE++KK+V++ A VHL+ESPK      A   +   S  PE + +P  E
Subjt:  TAGSAIMKNRYILTGTSWVTGAFSKVAKAAGEVGQKTKEKV--EETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTAGGACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCATCTGAACGAGATATCATGGAGTTTTTTTCCTTTTCTGGTGACATTGAATATCTGGAAATGCAGAG
TGAAAGTGAACGGTCTCAAATTGCTTATGTGACTTTTAAGGATGTTCAAGGTGCTGAGACTGCTGTTCTTCTGTCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGAATATGAGCTCCCTCCAGAAGCTACCGCGGCACCACCTGCCCCAGGAGCTAAAGAACCTGGTGCTGCTGAATCCGCCTTTCGGAAAGCCGAGGATGTG
GTTAGCGGCATGCTTGCCAAGGGCTTTATATTGGGTAAAGATGCAGTCAACTCCGCAAAGGCATTTGATGAGAAACATCAATTATCTTCCACGGCCTCAGCCAAAGTTGC
TACATTTGATAAGAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACATCGTTGGTGAGCGACAAAGTTCGGGAAGTCGACCAGAAGTTTCAGGTTTCAGAGAAGACTA
AATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCACTGCTGGGTCTGCCATTATGAAAAACCGATACATATTGACCGGGACTAGCTGGGTTACTGGCGCTTTCAGTAAG
GTAGCCAAGGCAGCTGGAGAGGTTGGTCAGAAAACAAAAGAGAAAGTCGAGGAGACGGAAGAAGAACAGAGAAAGAAGATGGTCGAAGATTTTGCTCAGGTTCATCTCTC
GGAATCCCCTAAAGGAGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCAGCAGCATCTGCACCCCCTGAGCCTCAACAACGCCCCAAGCCCGAACCCGCTCAAGAACGAA
ATCTATTCACGTGA
mRNA sequenceShow/hide mRNA sequence
CGTGTGTAGCGATTTTTCTTTCATCTGAGGCGACGAAGACTTGGGGCGCGCACTGTGAGAAAATCCCAAATTCAGAATCAAATTTTTCGGTTCAATTCGTATTGGATTCC
GGGTTCCCGGATATCGTCGGTTGATTCTGTCTCCGTTCCGGCGGTGTTATCTTAGTCATTTCCAGCGATGTCGGTTAGGACTGTTAAAGTCAGCAATGTCTCCTTGGGAG
CATCTGAACGAGATATCATGGAGTTTTTTTCCTTTTCTGGTGACATTGAATATCTGGAAATGCAGAGTGAAAGTGAACGGTCTCAAATTGCTTATGTGACTTTTAAGGAT
GTTCAAGGTGCTGAGACTGCTGTTCTTCTGTCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGAATATGAGCTCCCTCCAGAAGCTACCGCGGC
ACCACCTGCCCCAGGAGCTAAAGAACCTGGTGCTGCTGAATCCGCCTTTCGGAAAGCCGAGGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATATTGGGTAAAGATG
CAGTCAACTCCGCAAAGGCATTTGATGAGAAACATCAATTATCTTCCACGGCCTCAGCCAAAGTTGCTACATTTGATAAGAAAATTGGGTTCACTGAGAAAATTAGTGCT
GGTACATCGTTGGTGAGCGACAAAGTTCGGGAAGTCGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCACTGCTGG
GTCTGCCATTATGAAAAACCGATACATATTGACCGGGACTAGCTGGGTTACTGGCGCTTTCAGTAAGGTAGCCAAGGCAGCTGGAGAGGTTGGTCAGAAAACAAAAGAGA
AAGTCGAGGAGACGGAAGAAGAACAGAGAAAGAAGATGGTCGAAGATTTTGCTCAGGTTCATCTCTCGGAATCCCCTAAAGGAGGAGGAGGAGGAGGAGCAGCAGCAGCA
GCAGCAGCAGCATCTGCACCCCCTGAGCCTCAACAACGCCCCAAGCCCGAACCCGCTCAAGAACGAAATCTATTCACGTGA
Protein sequenceShow/hide protein sequence
MSVRTVKVSNVSLGASERDIMEFFSFSGDIEYLEMQSESERSQIAYVTFKDVQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAAPPAPGAKEPGAAESAFRKAEDV
VSGMLAKGFILGKDAVNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSTAGSAIMKNRYILTGTSWVTGAFSK
VAKAAGEVGQKTKEKVEETEEEQRKKMVEDFAQVHLSESPKGGGGGGAAAAAAAASAPPEPQQRPKPEPAQERNLFT