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Carg23411 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23411
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:3134355..3137082
RNA-Seq ExpressionCarg23411
SyntenyCarg23411
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012533.1 hypothetical protein SDJN02_25285, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-0561.54Show/hide
Query:  WHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI
        W+SF  PI+V PPPNSP  GP SLLAH LV TPL   T  L H  +S SDTI
Subjt:  WHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI

KAG7020717.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-0753.73Show/hide
Query:  MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI
        +G+HNPP F  QRPRW  FL PIDV PPPN PP     L        PL G    LAH P+S SDTI
Subjt:  MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI

KAG7026138.1 hypothetical protein SDJN02_12637, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-0762.75Show/hide
Query:  HSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI
        HSFLPPIDVG PPNSP LG + L        PLW T R+L HRP+S SDTI
Subjt:  HSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI

KAG7028243.1 hypothetical protein SDJN02_09424, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-68100Show/hide
Query:  MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTISRFVRVILAQGHANLPFPFAFGFQKLQQSLKSR
        MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTISRFVRVILAQGHANLPFPFAFGFQKLQQSLKSR
Subjt:  MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTISRFVRVILAQGHANLPFPFAFGFQKLQQSLKSR

Query:  LSASLGARYRREFFYLERVHKFDLVFAS
        LSASLGARYRREFFYLERVHKFDLVFAS
Subjt:  LSASLGARYRREFFYLERVHKFDLVFAS

KAG7037352.1 hypothetical protein SDJN02_00977, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-0472.5Show/hide
Query:  PPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI
        P N PPLG ASLLAH  V TPLW    RLAH PVSGSDTI
Subjt:  PPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTI

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATCACAATCCACCCCCCTTCTGGGGTCAACGTCCTCGTTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCACCCCCAAATTCACCCCCTTTAGGGCCAGC
GTCCTTACTGGCACACCGCCTCGTGCCTACCCCCCTTTGGGGAACAACGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTCTCGATTTGTGCGTGTCA
TCCTTGCGCAGGGCCATGCTAATCTTCCCTTCCCTTTTGCCTTTGGGTTCCAAAAGCTCCAACAATCCTTAAAAAGCCGCCTCTCGGCCTCCCTGGGAGCTAGATATAGA
CGAGAGTTCTTCTATCTCGAACGTGTTCATAAGTTCGATTTAGTATTCGCATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATCACAATCCACCCCCCTTCTGGGGTCAACGTCCTCGTTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCACCCCCAAATTCACCCCCTTTAGGGCCAGC
GTCCTTACTGGCACACCGCCTCGTGCCTACCCCCCTTTGGGGAACAACGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTCTCGATTTGTGCGTGTCA
TCCTTGCGCAGGGCCATGCTAATCTTCCCTTCCCTTTTGCCTTTGGGTTCCAAAAGCTCCAACAATCCTTAAAAAGCCGCCTCTCGGCCTCCCTGGGAGCTAGATATAGA
CGAGAGTTCTTCTATCTCGAACGTGTTCATAAGTTCGATTTAGTATTCGCATCGTGA
Protein sequenceShow/hide protein sequence
MGHHNPPPFWGQRPRWHSFLPPIDVGPPPNSPPLGPASLLAHRLVPTPLWGTTRRLAHRPVSGSDTISRFVRVILAQGHANLPFPFAFGFQKLQQSLKSRLSASLGARYR
REFFYLERVHKFDLVFAS