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Carg23453 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23453
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:9317955..9319941
RNA-Seq ExpressionCarg23453
SyntenyCarg23453
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586160.1 Arogenate dehydratase/prephenate dehydratase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4169.23Show/hide
Query:  QGVAGSHSEDGALQHTLLCGSV----------------------------SFLTGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLG
        +G+ GSHSEDGALQHTLLCGSV                              LTGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFE       
Subjt:  QGVAGSHSEDGALQHTLLCGSV----------------------------SFLTGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLG

Query:  LDVGASQLSSMATTRNLAVEVVSR-------DRAIPRKTAPALDRAIPRKTAPALD
         DVGASQLSSMATTRNLAVEVVSR       DRAIPRKTAPALDRAIPRKTAPALD
Subjt:  LDVGASQLSSMATTRNLAVEVVSR-------DRAIPRKTAPALDRAIPRKTAPALD

KAG7020993.1 hypothetical protein SDJN02_17681, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-4650.56Show/hide
Query:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHC-----------------QGVAGSHS
        EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQ  +     L+  +    L  IRSEYPPQELKSLRDSLAQ+                     +G+ GSHS
Subjt:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHC-----------------QGVAGSHS

Query:  EDGALQHTLLCGSV--------------------------------------SFLTGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLL
        EDGALQHTLLCGSV                                        LTGASDEDF NSHEIEMVRVADGVLSYSKISLLLLQPNSFE  +++
Subjt:  EDGALQHTLLCGSV--------------------------------------SFLTGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLL

Query:  ----------------------LGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTA
                              LG +    +L     +R L     + DRAI RKTAPALDRAIPRKTA
Subjt:  ----------------------LGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTA

KAG7020994.1 hypothetical protein SDJN02_17682, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-101100Show/hide
Query:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHCQGVAGSHSEDGALQHTLLCGSVSFL
        EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHCQGVAGSHSEDGALQHTLLCGSVSFL
Subjt:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHCQGVAGSHSEDGALQHTLLCGSVSFL

Query:  TGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTAPALDPSNS
        TGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTAPALDPSNS
Subjt:  TGASDEDFCNSHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTAPALDPSNS

XP_022965451.1 uncharacterized protein LOC111465355 [Cucurbita maxima]9.1e-1144.37Show/hide
Query:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFH--------------------------
        EKLLKKVSLA QPALVLFSLKHAV+S QA          L+  +    L  IRSEYPPQELKSLRDSLAQ+                             
Subjt:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFH--------------------------

Query:  ------------CQGVAGSHSEDGAL--QHTLLCGSVSFLTG
                     +G+ GSHSEDGAL    TLL  S+ F  G
Subjt:  ------------CQGVAGSHSEDGAL--QHTLLCGSVSFLTG

TrEMBL top hitse value%identityAlignment
A0A6J1HLQ3 uncharacterized protein LOC1114653554.4e-1144.37Show/hide
Query:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFH--------------------------
        EKLLKKVSLA QPALVLFSLKHAV+S QA          L+  +    L  IRSEYPPQELKSLRDSLAQ+                             
Subjt:  EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFH--------------------------

Query:  ------------CQGVAGSHSEDGAL--QHTLLCGSVSFLTG
                     +G+ GSHSEDGAL    TLL  S+ F  G
Subjt:  ------------CQGVAGSHSEDGAL--QHTLLCGSVSFLTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAAAGCTGTTGAAAAAGGTTTCTCTGGCACATCAACCAGCCTTGGTCCTCTTCAGCTTGAAGCACGCAGTGGTTTCCACACAGGCAGAGCAAATGTCGAGCTCCCACCA
TGGTCGCCTCTTGTTCGAGAGCAGTTTGGGCTCGCTTGACATCATCCGATCAGAATATCCTCCTCAGGAGCTGAAGAGTCTAAGAGACTCACTGGCTCAAAGGGACTTCC
ACTGTCAAGGGGTTGCAGGATCACATAGTGAGGATGGAGCCCTGCAACATACCCTACTTTGTGGAAGTGTTTCCTTTCTCACGGGTGCAAGTGATGAGGATTTTTGTAAT
TCACATGAGATCGAGATGGTTCGTGTTGCTGATGGTGTGTTGTCGTACTCCAAAATCAGCCTTCTTCTATTGCAGCCCAATTCATTTGAAGAGGCTGTTTTGTTGTTGGG
ATTAGATGTAGGTGCTTCCCAGTTATCCTCCATGGCAACCACCAGAAATTTGGCCGTGGAAGTCGTATCTCGGGACCGAGCAATTCCTAGGAAAACTGCCCCGGCTCTAG
ACCGAGCAATTCCTAGGAAAACTGCCCCGGCTCTAGACCCGAGCAATTCCTAG
mRNA sequenceShow/hide mRNA sequence
GAAAAGCTGTTGAAAAAGGTTTCTCTGGCACATCAACCAGCCTTGGTCCTCTTCAGCTTGAAGCACGCAGTGGTTTCCACACAGGCAGAGCAAATGTCGAGCTCCCACCA
TGGTCGCCTCTTGTTCGAGAGCAGTTTGGGCTCGCTTGACATCATCCGATCAGAATATCCTCCTCAGGAGCTGAAGAGTCTAAGAGACTCACTGGCTCAAAGGGACTTCC
ACTGTCAAGGGGTTGCAGGATCACATAGTGAGGATGGAGCCCTGCAACATACCCTACTTTGTGGAAGTGTTTCCTTTCTCACGGGTGCAAGTGATGAGGATTTTTGTAAT
TCACATGAGATCGAGATGGTTCGTGTTGCTGATGGTGTGTTGTCGTACTCCAAAATCAGCCTTCTTCTATTGCAGCCCAATTCATTTGAAGAGGCTGTTTTGTTGTTGGG
ATTAGATGTAGGTGCTTCCCAGTTATCCTCCATGGCAACCACCAGAAATTTGGCCGTGGAAGTCGTATCTCGGGACCGAGCAATTCCTAGGAAAACTGCCCCGGCTCTAG
ACCGAGCAATTCCTAGGAAAACTGCCCCGGCTCTAGACCCGAGCAATTCCTAG
Protein sequenceShow/hide protein sequence
EKLLKKVSLAHQPALVLFSLKHAVVSTQAEQMSSSHHGRLLFESSLGSLDIIRSEYPPQELKSLRDSLAQRDFHCQGVAGSHSEDGALQHTLLCGSVSFLTGASDEDFCN
SHEIEMVRVADGVLSYSKISLLLLQPNSFEEAVLLLGLDVGASQLSSMATTRNLAVEVVSRDRAIPRKTAPALDRAIPRKTAPALDPSNS