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Carg23468 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23468
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:9550777..9552233
RNA-Seq ExpressionCarg23468
SyntenyCarg23468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021009.1 hypothetical protein SDJN02_17697 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-91100Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM
        MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM

Query:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRVHSFSC
        PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRVHSFSC
Subjt:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRVHSFSC

XP_022937721.1 uncharacterized protein LOC111444037 [Cucurbita moschata]5.7e-8395.68Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM
        MESSDYFGRNSGQIHVQHHQIPAF DWDKARDLPI QYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRK PPPSAAARKARVTEKRYPQ GLKEHQM
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM

Query:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
        PLKKQQQGRVFDVTE GGARKFKQN+VSIPRRPPKSNATKPPKPVDEDLYKIPPE+LHSSKR
Subjt:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

XP_022965976.1 uncharacterized protein LOC111465695 [Cucurbita maxima]3.8e-7995.09Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGL-KEHQ
        MESSDY  RNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPP SAAARKARVTEKRYPQ GL KEHQ
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGL-KEHQ

Query:  MPLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
         PLKK QQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPP+PVDEDLYKIPPELLHSSKR
Subjt:  MPLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

XP_023538023.1 uncharacterized protein LOC111798907 [Cucurbita pepo subsp. pepo]6.8e-8496.91Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM
        MESSDYFGRNSG IH  HHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRK PPPSAAARKARVTEKRYPQ GLKEHQM
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM

Query:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
        PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
Subjt:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

XP_038889486.1 uncharacterized protein LOC120079394 [Benincasa hispida]5.4e-6578.57Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSA-AARKARVTEKRYPQAGLKEH-
        ME S Y  RNSGQIH+QHHQIPAFGDWDKA+DLPITQYFE+ARQAGLI YSSSSGE+GPC P SDLYS DRKKPPP A A RK RV EKR P  GLKEH 
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSA-AARKARVTEKRYPQAGLKEH-

Query:  --QMPLKKQ--QQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
          Q+P+KKQ  QQGRVFDVTETGGARK KQNDVS+P  P +SN ++PPKPVDEDLYKIPPELLHSSKR
Subjt:  --QMPLKKQ--QQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

TrEMBL top hitse value%identityAlignment
A0A1S3B517 uncharacterized protein LOC1034858595.4e-6377.78Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H
        ME S Y  RNSGQIH+QHHQIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPCLP SDLYS DR KP P    ARK RV EKRYP  GLKE H
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H

Query:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
        Q+P+KKQQ       GRVFDVTETGGARK KQND+ SIPR PP+SN T  PKPVDEDLYKIPPELLHSSKR
Subjt:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

A0A5A7V1J3 Uncharacterized protein1.2e-6277.33Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H
        ME S Y  RNSGQIH+QH QIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPCLP SDLYS DR KP P    ARK RV EKRYP  GLKE H
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H

Query:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRV
        Q+P+KKQQ       GRVFDVTETGGARK KQND+ SIPR PP+SN T  PKPVDEDLYKIPPELLHSSKRV
Subjt:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRV

A0A5D3DXR6 Uncharacterized protein1.4e-6377.91Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H
        ME S Y  RNSGQIH+QHHQIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPCLP SDLYS DR KP P    ARK RV EKRYP  GLKE H
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKP-PPSAAARKARVTEKRYPQAGLKE-H

Query:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRV
        Q+P+KKQQ       GRVFDVTETGGARK KQND+ SIPR PP+SN T  PKPVDEDLYKIPPELLHSSKRV
Subjt:  QMPLKKQQQ------GRVFDVTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRV

A0A6J1FB62 uncharacterized protein LOC1114440372.8e-8395.68Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM
        MESSDYFGRNSGQIHVQHHQIPAF DWDKARDLPI QYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRK PPPSAAARKARVTEKRYPQ GLKEHQM
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQM

Query:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
        PLKKQQQGRVFDVTE GGARKFKQN+VSIPRRPPKSNATKPPKPVDEDLYKIPPE+LHSSKR
Subjt:  PLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

A0A6J1HN41 uncharacterized protein LOC1114656951.9e-7995.09Show/hide
Query:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGL-KEHQ
        MESSDY  RNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPP SAAARKARVTEKRYPQ GL KEHQ
Subjt:  MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGL-KEHQ

Query:  MPLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
         PLKK QQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPP+PVDEDLYKIPPELLHSSKR
Subjt:  MPLKKQQQGRVFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein9.3e-1538.89Show/hide
Query:  QIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARK-ARVTEKRYPQAGLKEHQMPLKKQQQGRVFDVTETGG
        QIP FG+W++A ++PITQYFE  RQA  +  +S                    +P    A R+ A   EKR PQ  +++    +  Q      DV    G
Subjt:  QIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARK-ARVTEKRYPQAGLKEHQMPLKKQQQGRVFDVTETGG

Query:  ARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
         ++FK NDV++          KPPKPVDEDLYKIPPE +HSS R
Subjt:  ARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

AT5G18310.2 unknown protein1.4e-1840.52Show/hide
Query:  QIPAFGDWDKARDLPITQYFETARQAGLI--HYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQMPLKKQQQGRVFDVT---
        QIP FG+W++A ++PITQYFE  RQAGLI   Y+++S  +     SS   S   +    ++   + R    +   AG KE     K+  Q RV DV+   
Subjt:  QIPAFGDWDKARDLPITQYFETARQAGLI--HYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQMPLKKQQQGRVFDVT---

Query:  -----ETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR
             +  G ++FK NDV++          KPPKPVDEDLYKIPPE +HSS R
Subjt:  -----ETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKR

AT5G48500.1 unknown protein8.4e-0834.42Show/hide
Query:  GQIHVQHHQIPAFGDWDKARDLPITQYFETA--RQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQMPLKKQQQGR
        G  + +   +PAFG WD    +P TQ FETA  +Q   +HY+S   +    L + DLY       P      + R    + P     E +  + KQQ   
Subjt:  GQIHVQHHQIPAFGDWDKARDLPITQYFETA--RQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQMPLKKQQQGR

Query:  VFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLH-SSKR
          +      AR+F    VS P  P      K PKPVDEDLYK+ P+LL   SKR
Subjt:  VFDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLH-SSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCTCTGATTATTTTGGCAGAAACAGTGGTCAAATCCACGTTCAGCACCACCAAATCCCGGCGTTTGGCGACTGGGATAAGGCCAGGGATTTGCCGATTACTCA
GTATTTCGAAACTGCTCGTCAGGCTGGTTTGATTCACTACAGTTCCTCTTCCGGTGAAACCGGTCCCTGCCTTCCTTCTTCCGATTTGTACTCCGTCGATCGCAAAAAGC
CTCCGCCATCAGCGGCCGCACGCAAGGCACGGGTGACGGAAAAGCGTTACCCGCAAGCGGGATTAAAGGAACACCAGATGCCATTAAAGAAGCAACAACAAGGTAGAGTG
TTCGACGTGACGGAAACAGGAGGAGCGCGAAAATTCAAGCAGAACGACGTGTCGATCCCACGTCGTCCGCCTAAATCTAATGCTACTAAACCGCCCAAACCTGTCGATGA
AGATCTCTACAAAATCCCACCTGAGCTGCTCCATTCTTCAAAGCGGGTACATTCCTTCTCCTGCTGA
mRNA sequenceShow/hide mRNA sequence
GAGTGGTGTGTGAAAACAGGAACCCTCCAAAAAGCTTCTCTGAACTTTTTTGCTTTCTGTTTCGCTCTGATTTGTTCATCGCCTTCCGTTTTCTCTGCCTCCATTGTTGT
GTAATCAGAAGCTCCAAAAGTCAAGAATCCGTTGTTTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTCAGTTTGGTGGCTGCTTTTTAGTGTACTTCGTATGGAAT
CCTCTGATTATTTTGGCAGAAACAGTGGTCAAATCCACGTTCAGCACCACCAAATCCCGGCGTTTGGCGACTGGGATAAGGCCAGGGATTTGCCGATTACTCAGTATTTC
GAAACTGCTCGTCAGGCTGGTTTGATTCACTACAGTTCCTCTTCCGGTGAAACCGGTCCCTGCCTTCCTTCTTCCGATTTGTACTCCGTCGATCGCAAAAAGCCTCCGCC
ATCAGCGGCCGCACGCAAGGCACGGGTGACGGAAAAGCGTTACCCGCAAGCGGGATTAAAGGAACACCAGATGCCATTAAAGAAGCAACAACAAGGTAGAGTGTTCGACG
TGACGGAAACAGGAGGAGCGCGAAAATTCAAGCAGAACGACGTGTCGATCCCACGTCGTCCGCCTAAATCTAATGCTACTAAACCGCCCAAACCTGTCGATGAAGATCTC
TACAAAATCCCACCTGAGCTGCTCCATTCTTCAAAGCGGGTACATTCCTTCTCCTGCTGA
Protein sequenceShow/hide protein sequence
MESSDYFGRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPCLPSSDLYSVDRKKPPPSAAARKARVTEKRYPQAGLKEHQMPLKKQQQGRV
FDVTETGGARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRVHSFSC