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Carg23472 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23472
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAdenosylhomocysteinase, putative
Genome locationCarg_Chr12:9592205..9592759
RNA-Seq ExpressionCarg23472
SyntenyCarg23472
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051315.1 uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa]1.8e-8290.32Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV
        L+FTRT DFLGELKSYVREEDGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W AAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV

XP_022937598.1 uncharacterized protein LOC111443957 [Cucurbita moschata]1.4e-95100Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
        LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

XP_022965972.1 uncharacterized protein LOC111465691 [Cucurbita maxima]9.3e-9598.91Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSVAV
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
        LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

XP_023537990.1 uncharacterized protein LOC111798872 [Cucurbita pepo subsp. pepo]4.2e-9599.46Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
        LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

XP_038890643.1 uncharacterized protein LOC120080148 [Benincasa hispida]3.1e-8290.86Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSS S SISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSV V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGS--GEQRSAKVQQFEDSKWAAAPFPV
        L+FTRTSDFLGELKSYVREEDGSVILKLGGGLS LIF LEW+VLVLAFCLKYY YVEGNGS  G +RS KVQQFEDS W AAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGS--GEQRSAKVQQFEDSKWAAAPFPV

TrEMBL top hitse value%identityAlignment
A0A0A0LHB3 Uncharacterized protein3.4e-8290.32Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSS S SIS SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV
        L+FTRT+DFLGELKSYVREEDGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W AAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV

A0A5A7UCF0 Uncharacterized protein8.8e-8390.32Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV
        L+FTRT DFLGELKSYVREEDGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W AAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWAAAPFPV

A0A5D3DJ66 Uncharacterized protein1.3e-8189.3Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE---GNGSGEQRSAKVQQFEDSKWAAAPFPV
        L+FTRT DFLGELKSYVREEDGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVE   GNG G +RSAKVQQFEDS W AAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE---GNGSGEQRSAKVQQFEDSKWAAAPFPV

A0A6J1FGF2 uncharacterized protein LOC1114439577.0e-96100Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
        LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

A0A6J1HLR5 uncharacterized protein LOC1114656914.5e-9598.91Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSVAV
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV
        LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAAPFPV
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein3.1e-5665.57Show/hide
Query:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV
        MGL P  P  SI  SHY  HKLFL  NY+LLGA+SSCIFLTLSLRLIPS+CGFF+I LHA TIA AVSGCA A+    RW+  HM+ TVLTAIFQGSV+V
Subjt:  MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAV

Query:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEG--NGSGEQRSAKVQQFE---DSKWA
        LIFT TS+FL  L SYVRE++ S+ILKL GGL  +IF LEW+VLVLAF LKYY YV+G  NG   +R+ KVQ  E   +S WA
Subjt:  LIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEG--NGSGEQRSAKVQQFE---DSKWA

AT5G16250.1 unknown protein2.8e-5767.22Show/hide
Query:  SSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTR
        SS SP +  SHY+ HK+FL  NYILLGAASSCIFLTLSLRLIPS+CGF +I LHA TIA AVSGCA A+    RW+  HMV TVLTAIFQGSV+VLIFT 
Subjt:  SSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTR

Query:  TSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE-GNGSGEQRSAKVQQFEDSKWAAAPFPV
        TS FLG LKSYVREED +VILKLGGGL  +IF L+W+VLV AF LKYY YV+ G+G   +R+ KVQ  E+ K    PF V
Subjt:  TSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE-GNGSGEQRSAKVQQFEDSKWAAAPFPV

AT5G36710.1 unknown protein7.7e-4760.45Show/hide
Query:  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAM-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRT
        +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     +A A+ R +G HMV TVLTAIFQG+V+VLIFTRT
Subjt:  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAM-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRT

Query:  SDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF
         DFL  LKSYVREEDG VILKL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Subjt:  SDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF

AT5G36800.1 unknown protein7.7e-4760.45Show/hide
Query:  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAM-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRT
        +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     +A A+ R +G HMV TVLTAIFQG+V+VLIFTRT
Subjt:  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAM-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRT

Query:  SDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF
         DFL  LKSYVREEDG VILKL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Subjt:  SDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTG
CATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTG
CCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTT
GGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGC
GTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAG
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTG
CATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTG
CCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTT
GGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGC
GTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAG
TTTGA
Protein sequenceShow/hide protein sequence
MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFL
GELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV