; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23477 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23477
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor IBH1-like 1
Genome locationCarg_Chr12:9661752..9662180
RNA-Seq ExpressionCarg23477
SyntenyCarg23477
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586187.1 Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-67100Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

KAG7021018.1 Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-67100Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

XP_022938061.1 transcription factor IBH1-like 1 [Cucurbita moschata]2.9e-6497.89Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKT LRKIARKVARSRTHL  SRSRSVARSVAKRLVHKRTKL
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

XP_022965992.1 transcription factor IBH1-like 1 [Cucurbita maxima]8.6e-5688.03Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNT MNFLERK AIKA+SDLAMAATRNGAT WSRAIIAKSIQAP EAKLRRKTTL KI RK+AR  TH   SRSRSVARSVAKRLV KRTK+
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFM+DEALLIDEALDYISFLRVQVDGMRFLA+CK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

XP_023537774.1 transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo]5.7e-6092.96Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNTNMNFLERKNAIKAASDLAMA TRNGAT WSRAIIAKSIQAPPEAKLRRKT LRKI RKVAR  TH   SRSRSVARSVAKRLVHKRTKL
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLA+CK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

TrEMBL top hitse value%identityAlignment
A0A0A0LM92 Uncharacterized protein2.3e-3055.28Show/hide
Query:  MGLNPITFSN-TNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEA-------------KLRRKTTLRKIARKVARSRTHLSR-SRSR
        +GL   T S+ TNMNFL+RK AIK ++D AMA TR G T WS++IIAKS++  APP+A             K R  T L+K+ RK+ R     SR   S+
Subjt:  MGLNPITFSN-TNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEA-------------KLRRKTTLRKIARKVARSRTHLSR-SRSR

Query:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD--CK
         + R++AKRLV KRTK+LRSL+PGGEFM+DE LLI+EALDYI FL+ QVDGMRFLA+  CK
Subjt:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD--CK

A0A1S3BT01 uncharacterized protein LOC1034933952.6e-3458.49Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEAKLRRKTT-------------LRKIARKVARSRTHLSR-SRSRS
        +GL   T S TNMNFL+RK AIK ++D AMAATRNG T WS++IIAK ++  APPEA L R+T+             LRK+ RK+ R     SR   S++
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEAKLRRKTT-------------LRKIARKVARSRTHLSR-SRSRS

Query:  VARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK
        +  ++AKRLV KRTK+LRSL+PGGEFMKDEALLI+EALDYI FL+ QVDGMRFLA+ CK
Subjt:  VARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK

A0A5D3CK75 Transcription factor IBH15.3e-3559.12Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEAKLRRKTT-------------LRKIARKVARSRTHLSR-SRSRS
        +GL   T S TNMNFL+RK AIK ++D AMAATRNG T WS++IIAKS++  APPEA L R+T+             LRK+ RK+ R     SR   S++
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQ--APPEAKLRRKTT-------------LRKIARKVARSRTHLSR-SRSRS

Query:  VARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK
        +  ++AKRLV KRTK+LRSL+PGGEFMKDEALLI+EALDYI FL+ QVDGMRFLA+ CK
Subjt:  VARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK

A0A6J1FC37 transcription factor IBH1-like 11.4e-6497.89Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKT LRKIARKVARSRTHL  SRSRSVARSVAKRLVHKRTKL
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

A0A6J1HLT3 transcription factor IBH1-like 14.2e-5688.03Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL
        MGLNPITFSNT MNFLERK AIKA+SDLAMAATRNGAT WSRAIIAKSIQAP EAKLRRKTTL KI RK+AR  TH   SRSRSVARSVAKRLV KRTK+
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKL

Query:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK
        LRSLVPGGEFM+DEALLIDEALDYISFLRVQVDGMRFLA+CK
Subjt:  LRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLADCK

SwissProt top hitse value%identityAlignment
O80482 Transcription factor bHLH1491.2e-0432.77Show/hide
Query:  IKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEA
        I+  +D  +AA+  G T WSRAI+A  ++    AKL++        RK  +S  +    +  +    +    V ++ K+L  LVPG   +    LL DEA
Subjt:  IKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEA

Query:  LDYISFLRVQVDGMRFLAD
         DYI+ L +QV  M  LA+
Subjt:  LDYISFLRVQVDGMRFLAD

Q9C8Z9 Transcription factor bHLH1481.9e-0532.37Show/hide
Query:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK
        LN    ++++    +R  A++ A+D A+A +  G T WSRAI+A  I+     + R + T+   A   V  S ++ SR R  SV R   K +  V+++ +
Subjt:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK

Query:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL
        +L  LVPG    +   ++++EA DYI  L +QV  M  L
Subjt:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL

Q9M0B9 Transcription factor IBH1-like 14.1e-1642.04Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR
        MGL     S  N +  ERK AIK ++D+AMA+ R G T WSRA+I K+              I+A      KL +KT   RKI R+  +     S+S S 
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR

Query:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD
          A + AKRLV +RT+ LR++VPGGE M ++ LL+ E LDYI  L+ QV+ MR + D
Subjt:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD

Arabidopsis top hitse value%identityAlignment
AT3G06590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-0632.37Show/hide
Query:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK
        LN    ++++    +R  A++ A+D A+A +  G T WSRAI+A  I+     + R + T+   A   V  S ++ SR R  SV R   K +  V+++ +
Subjt:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK

Query:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL
        +L  LVPG    +   ++++EA DYI  L +QV  M  L
Subjt:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL

AT3G06590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-0632.37Show/hide
Query:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK
        LN    ++++    +R  A++ A+D A+A +  G T WSRAI+A  I+     + R + T+   A   V  S ++ SR R  SV R   K +  V+++ +
Subjt:  LNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIA-RKVARSRTHLSRSRSRSVARSVAKRL--VHKRTK

Query:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL
        +L  LVPG    +   ++++EA DYI  L +QV  M  L
Subjt:  LLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFL

AT4G30410.1 sequence-specific DNA binding transcription factors2.9e-1742.04Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR
        MGL     S  N +  ERK AIK ++D+AMA+ R G T WSRA+I K+              I+A      KL +KT   RKI R+  +     S+S S 
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR

Query:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD
          A + AKRLV +RT+ LR++VPGGE M ++ LL+ E LDYI  L+ QV+ MR + D
Subjt:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD

AT4G30410.2 sequence-specific DNA binding transcription factors2.9e-1742.04Show/hide
Query:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR
        MGL     S  N +  ERK AIK ++D+AMA+ R G T WSRA+I K+              I+A      KL +KT   RKI R+  +     S+S S 
Subjt:  MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKS--------------IQAPP--EAKLRRKTTL-RKIARKVARSRTHLSRSRSR

Query:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD
          A + AKRLV +RT+ LR++VPGGE M ++ LL+ E LDYI  L+ QV+ MR + D
Subjt:  SVARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD

AT5G57780.1 EXPRESSED IN: 18 plant structures2.1e-2046.92Show/hide
Query:  MNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARS---VAKRLVHKRTKLLRSLVPGGE
        +N  ERKNAI+ +SDLAMAA RNG+T WSRA+I++S           KT  + +AR++ +   +  ++R   + R+    AK  V KRT LL+SLVPGGE
Subjt:  MNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARS---VAKRLVHKRTKLLRSLVPGGE

Query:  FMKDEALLIDEALDYISFLRVQVDGMRFLA
         + D+  LI E LDYI +LR QVD MR +A
Subjt:  FMKDEALLIDEALDYISFLRVQVDGMRFLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTAAACCCCATCACCTTCTCAAACACAAACATGAACTTCTTAGAGAGAAAAAACGCCATAAAAGCAGCCTCTGACTTGGCCATGGCTGCAACGAGAAACGGAGC
GACTCATTGGAGTCGAGCCATCATTGCCAAATCTATACAAGCTCCACCTGAGGCCAAGCTTCGAAGGAAGACGACGCTACGTAAGATTGCTCGAAAAGTGGCTAGGAGTC
GCACGCACCTGTCGAGGTCGAGGTCGAGGTCCGTAGCGAGATCAGTTGCTAAGAGATTGGTTCATAAAAGGACCAAACTTCTAAGGAGTTTGGTTCCTGGGGGAGAATTT
ATGAAGGATGAAGCTTTGTTGATTGATGAAGCCCTAGATTACATATCATTTCTTCGAGTTCAAGTTGATGGAATGCGGTTTCTTGCTGATTGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTAAACCCCATCACCTTCTCAAACACAAACATGAACTTCTTAGAGAGAAAAAACGCCATAAAAGCAGCCTCTGACTTGGCCATGGCTGCAACGAGAAACGGAGC
GACTCATTGGAGTCGAGCCATCATTGCCAAATCTATACAAGCTCCACCTGAGGCCAAGCTTCGAAGGAAGACGACGCTACGTAAGATTGCTCGAAAAGTGGCTAGGAGTC
GCACGCACCTGTCGAGGTCGAGGTCGAGGTCCGTAGCGAGATCAGTTGCTAAGAGATTGGTTCATAAAAGGACCAAACTTCTAAGGAGTTTGGTTCCTGGGGGAGAATTT
ATGAAGGATGAAGCTTTGTTGATTGATGAAGCCCTAGATTACATATCATTTCTTCGAGTTCAAGTTGATGGAATGCGGTTTCTTGCTGATTGCAAATGA
Protein sequenceShow/hide protein sequence
MGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAIIAKSIQAPPEAKLRRKTTLRKIARKVARSRTHLSRSRSRSVARSVAKRLVHKRTKLLRSLVPGGEF
MKDEALLIDEALDYISFLRVQVDGMRFLADCK