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Carg23484 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23484
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUBA domain-containing protein
Genome locationCarg_Chr12:9712798..9715669
RNA-Seq ExpressionCarg23484
SyntenyCarg23484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021025.1 hypothetical protein SDJN02_17713, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-34100Show/hide
Query:  MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Subjt:  MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

XP_022938054.1 E3 ubiquitin-protein ligase BRE1A-like isoform X1 [Cucurbita moschata]2.8e-2398.59Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

XP_022938055.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita moschata]2.8e-2398.59Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

XP_022965830.1 uncharacterized protein LOC111465598 isoform X1 [Cucurbita maxima]1.5e-2194.37Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

XP_022965831.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita maxima]1.5e-2194.37Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

TrEMBL top hitse value%identityAlignment
A0A6J1ESJ7 UBX domain-containing protein 1-like4.8e-1374.65Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQI KEKEKEEK+LE++REKD+IRSGKELQEAKR AE  E KRY DSRQA+ +EEK+A+EKVLQ L+Q+K
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

A0A6J1FC35 UBX domain-containing protein 1-like isoform X21.3e-2398.59Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

A0A6J1FCY3 E3 ubiquitin-protein ligase BRE1A-like isoform X11.3e-2398.59Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

A0A6J1HMR5 UBX domain-containing protein 1-like isoform X27.3e-2294.37Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

A0A6J1HPV0 uncharacterized protein LOC111465598 isoform X17.3e-2294.37Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNK
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein1.6e-0854.93Show/hide
Query:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        R++  K+KE+EEK +E+ REK++IR GKEL EAKRM E  E KR    R+AE +EEK+A+EK+ Q LE++K
Subjt:  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

AT5G48690.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060)6.2e-0547.14Show/hide
Query:  DQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        +Q  K +E++E + E+ REK++IR+GKEL E KR+AE  E KR    R+AE  EEKKA+EK++  +  +K
Subjt:  DQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

AT5G48690.2 FUNCTIONS IN: molecular_function unknown4.7e-0545.83Show/hide
Query:  QRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
        +++Q  K +E++E + E+ REK++IR+GKEL E KR+AE  E KR    R+AE  EEKKA+EK++  +  +K
Subjt:  QRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCGTAGTGAAAAACCCTTAATTTCTCGTCGGCTTCTTAGGAACTTCTTACAAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAA
ACGAAGGGAAAAGGATCAAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAA
AGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCGTAGTGAAAAACCCTTAATTTCTCGTCGGCTTCTTAGGAACTTCTTACAAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAA
ACGAAGGGAAAAGGATCAAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAA
AGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAG
Protein sequenceShow/hide protein sequence
MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK