; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23535 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23535
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr06:3567291..3567869
RNA-Seq ExpressionCarg23535
SyntenyCarg23535
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596776.1 hypothetical protein SDJN03_09956, partial [Cucurbita argyrosperma subsp. sororia]1.4e-98100Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQ
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQ
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQ

XP_022958196.1 uncharacterized protein LOC111459467 [Cucurbita moschata]3.8e-99100Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

XP_023005568.1 uncharacterized protein LOC111498512 [Cucurbita maxima]5.5e-9898.96Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFG HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

XP_023540529.1 uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo]1.4e-9899.48Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

XP_038904159.1 uncharacterized protein LOC120090516 [Benincasa hispida]5.3e-8588.02Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSI+ +P  STSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+ AS RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VA+LV+TRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEG G + +    MRSAKV+QDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

TrEMBL top hitse value%identityAlignment
A0A0A0L253 Uncharacterized protein3.7e-8488.54Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVE   GS N  AAMRSAKV+QDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

A0A1S3BL21 uncharacterized protein LOC1034910047.5e-8589.06Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVEG G + NG AAMRSAKV+QDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

A0A5D3D734 Uncharacterized protein7.5e-8589.06Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVEG G + NG AAMRSAKV+QDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

A0A6J1H1G8 uncharacterized protein LOC1114594671.8e-99100Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

A0A6J1L2J4 uncharacterized protein LOC1114985122.7e-9898.96Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFG HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein6.3e-6064.13Show/hide
Query:  PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTR
        PQ   S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL++T 
Subjt:  PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTR

Query:  TGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        T +FL  L SYVRE++ ++ILKLAGGL V +F LEW+VL LAFFLKYYA+V+   G  NG A  R+ KV+ +E LK+ PW FQV
Subjt:  TGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

AT5G16250.1 unknown protein8.5e-6566.67Show/hide
Query:  GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVY
        G   SS+ +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TIAAAVSGCA AS    RW+  HMV TVLTAIFQGSV+VL++
Subjt:  GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVY

Query:  TRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV
        T T  FLG LKSYVREED AVILKL GGL + +F L+W+VL  AFFLKYYA+V+G    G+G A  R+ KV+ +E+ KDWPWPFQV
Subjt:  TRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

AT5G36710.1 unknown protein5.4e-5162.5Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     ++TAS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-WPFQV
        GDFL  LKSYVREEDG VILKL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +PFQ+
Subjt:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-WPFQV

AT5G36800.1 unknown protein5.4e-5162.5Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     ++TAS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-WPFQV
        GDFL  LKSYVREEDG VILKL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +PFQ+
Subjt:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-WPFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTCCATAAGTGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGC
CTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCG
CCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGG
GACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCT
TACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGATGAGGATTTGA
AGGACTGGCCTTGGCCGTTTCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTCCATAAGTGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGC
CTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCG
CCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGG
GACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCT
TACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGATGAGGATTTGA
AGGACTGGCCTTGGCCGTTTCAAGTTTGA
Protein sequenceShow/hide protein sequence
MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTG
DFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV