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Carg23537 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23537
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:3557597..3558656
RNA-Seq ExpressionCarg23537
SyntenyCarg23537
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596774.1 hypothetical protein SDJN03_09954, partial [Cucurbita argyrosperma subsp. sororia]8.4e-5578.01Show/hide
Query:  NHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIG
        NH+C       VHPLL    +D                  RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIG
Subjt:  NHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIG

Query:  LLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        LLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
Subjt:  LLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

KAG7028302.1 hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-95100Show/hide
Query:  MTISSGHHIPTDEDHSAPSGSFNNHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASA
        MTISSGHHIPTDEDHSAPSGSFNNHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASA
Subjt:  MTISSGHHIPTDEDHSAPSGSFNNHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASA

Query:  TMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        TMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
Subjt:  TMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

XP_008449006.1 PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]1.5e-2484.13Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        MCCFGK+CM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG LCG GRPFF APP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

XP_023553402.1 uncharacterized protein LOC111810828 [Cucurbita pepo subsp. pepo]8.5e-2379.69Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFF-AAPPRRF
        MCCFGKVCM C+CL+LV VA+G LFGFG+FKDGFHKIKDK DFCDG +CG GRPFF AAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFF-AAPPRRF

XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]5.0e-2377.14Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLC-------GRGRPFFAAPPRRF
        MCCFGKVCM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVD+CDG LC       G GRPFFAAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLC-------GRGRPFFAAPPRRF

TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein3.0e-1875.81Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRG--RPFFAAPP
        MCC GKVCM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG  CG G    F  APP
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRG--RPFFAAPP

A0A1S3BL26 uncharacterized protein LOC1034910087.5e-2584.13Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        MCCFGK+CM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG LCG GRPFF APP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

A0A6J1E285 uncharacterized protein LOC1110257963.4e-1770.97Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
        MCC GK+CM C CL+ VAVA+GLLFGFG+FKDGFHKIKDKVDFCDG LC  G  F     RR
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR

A0A6J1EWB7 uncharacterized protein LOC1114387737.0e-2376.12Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGR----GRPFFAAPPRRF
        MCCFGKVCM C+CL+LV VA+G LFGFG+FKDGFHKIKDK DFCDG +CG     GRPFFAAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGR----GRPFFAAPPRRF

W9QQT2 Uncharacterized protein8.9e-1865.62Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCD----GDLCGRGRPFFAAPP
        MCC G++CM C+CL+L+ + IGLLFGFG+FK+GFHK+KD VDFCD    G  CG GRPFFA PP
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCD----GDLCGRGRPFFAAPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein5.5e-1253.23Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDF-------CDGDLCGRGRPF
        MCC G++CM C+CL+LV +AIG LFGFG+FKDGFHKI + +         C G L  RG  F
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDF-------CDGDLCGRGRPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCTCTAGCGGCCACCACATACCCACTGATGAAGACCATAGTGCACCCTCCGGTAGCTTTAATAACCATCATTGCAGTATTCATCGACTTGCTACTGTGCACCC
ACTACTGAAGGTCTTCTGTGAAGATGACTCTGGTGACAACCACACACCCATCATTGACCATGGATGGCAACCACAATTCCGCCATCGCCTTCAAAAGCACCTCCATCTTC
CTTCCTCCCTTCCTCCTCTTTCTCTGCCTCGCCATTTCCTGCCACAAATTCACACCAACGAGCAAGATCCGGCCTCTGCGACCATGTGCTGCTTTGGAAAGGTGTGCATG
TTCTGCTCTTGCCTAGTTCTGGTGGCCGTCGCCATCGGATTGCTCTTCGGTTTCGGAATTTTCAAAGACGGATTCCATAAGATTAAGGATAAGGTCGATTTCTGCGATGG
AGATCTCTGCGGCCGTGGAAGACCTTTCTTCGCTGCGCCTCCTCGTCGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCATCTCTAGCGGCCACCACATACCCACTGATGAAGACCATAGTGCACCCTCCGGTAGCTTTAATAACCATCATTGCAGTATTCATCGACTTGCTACTGTGCACCC
ACTACTGAAGGTCTTCTGTGAAGATGACTCTGGTGACAACCACACACCCATCATTGACCATGGATGGCAACCACAATTCCGCCATCGCCTTCAAAAGCACCTCCATCTTC
CTTCCTCCCTTCCTCCTCTTTCTCTGCCTCGCCATTTCCTGCCACAAATTCACACCAACGAGCAAGATCCGGCCTCTGCGACCATGTGCTGCTTTGGAAAGGTGTGCATG
TTCTGCTCTTGCCTAGTTCTGGTGGCCGTCGCCATCGGATTGCTCTTCGGTTTCGGAATTTTCAAAGACGGATTCCATAAGATTAAGGATAAGGTCGATTTCTGCGATGG
AGATCTCTGCGGCCGTGGAAGACCTTTCTTCGCTGCGCCTCCTCGTCGCTTCTAG
Protein sequenceShow/hide protein sequence
MTISSGHHIPTDEDHSAPSGSFNNHHCSIHRLATVHPLLKVFCEDDSGDNHTPIIDHGWQPQFRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCM
FCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF