; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23549 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23549
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationCarg_Chr06:3438113..3444403
RNA-Seq ExpressionCarg23549
SyntenyCarg23549
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-22099.49Show/hide
Query:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-223100Show/hide
Query:  MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEF
        MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEF
Subjt:  MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEF

Query:  DMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPN
        DMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPN
Subjt:  DMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPN

Query:  GSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE
        GSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE
Subjt:  GSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE

Query:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]1.4e-22099.49Show/hide
Query:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]3.7e-21898.21Show/hide
Query:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSG+ KNLH+MSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]8.8e-22098.98Show/hide
Query:  MSGKGKNLHNMSESDSE-QDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSESDSE +DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSE-QDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC15.8e-20190.56Show/hide
Query:  MSGKGKNLHNMSESDSEQD-VGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSES+SEQ+ V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVIDLKEDD+E
Subjt:  MSGKGKNLHNMSESDSEQD-VGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDP+LANAFRRILI+EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PIRVDPRLF+YSDKD PNE NTIVFRLH  CERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL-PEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQ+TL  EF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+E+IEDELA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL-PEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA

Query:  EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+ KCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC12.9e-20091.05Show/hide
Query:  MSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLA
        MS+S+SEQ  GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+EFDMIGIDP+LA
Subjt:  MSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDK
        NAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSK LTWLPNGSEFPLVSDK
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDK

Query:  SVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVF
        SV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL E+IEDELAEELK KCPV+VF
Subjt:  SVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVF

Query:  DIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        DIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  DIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC17.1e-19988.46Show/hide
Query:  MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEF
        MS K K   ++  S  EQ VGKEGIEWIMNLPDVPMKLPPH+EL RTRVECKADAPIHTDTIQYSGAYAS+G+DNSL+LD FR NFKIEVIDL EDD+EF
Subjt:  MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEF

Query:  DMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPN
        DMIGIDP+LANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLH RCERGKPRLT TSKALTWLPN
Subjt:  DMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPN

Query:  GSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE
        GSEFPLVSDKSV N+KPKTYTSFSCSQD LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAEE
Subjt:  GSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE

Query:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LK+KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC16.6e-22199.49Show/hide
Query:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC11.8e-21898.21Show/hide
Query:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSG+ KNLH+MSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE

Query:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC12.7e-7847.43Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  R+RV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE     I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG
        P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  GKK A VA PR  T  RE  R 
Subjt:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG

Query:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        E  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC11.4e-6639.44Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        V+  RT +   +D      ++ + G Y     DN   LD F+KN K+ +  L ++ M F++ GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHVRCERGK---------PRLTATSKA----LTWLPNGSEFPLVSDKSVSNTKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL   S+     L W P G +                   
Subjt:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHVRCERGK---------PRLTATSKA----LTWLPNGSEFPLVSDKSVSNTKPKTYTS

Query:  FSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRA
                  FA+NPI   + DI++A+L  GQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +   P  V ++E+  +GKK+A
Subjt:  FSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRA

Query:  TVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  TVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC12.1e-7848.29Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  RTRV        +  T  + G YA  G D++   + F KNF+++V+ + ED +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE     I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG
        P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL       V ++E++  GKK A VA  R  T  RE  R 
Subjt:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG

Query:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        E  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC11.4e-7948.57Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  RTRV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE A   I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG
        P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V ++++I  GKK A VA PR  T  RE  R 
Subjt:  PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG

Query:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        E  +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac11.3e-7242.9Show/hide
Query:  PHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
        P++E +RT+V        +     YSGAY S+G DNS  L+ F++NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ

Query:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHVRCER----GK-PRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL
        DEVLAHRLG+IPI+VDPR F +     PN+    ++T++F+L V+CE+    GK    TA SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHVRCER----GK-PRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL

Query:  PEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRAC
        P   + P  P + DI + +L  GQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED      +   ARP  C
Subjt:  PEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRAC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        T+CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 432.5e-14368.77Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGAY+S+G+DNS+RL++F ++FK++VI L E DM FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCS
        KV VANNTS++QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LHV+C +G PR    +  L WLPNGSE  L+ +   S T PKTYTSF+ S
Subjt:  KVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCS

Query:  QDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR
        QD+ PEFA NPI P   DI++A+L  GQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++ E + AEEL   CP  VFDIED+  G+KRATVAR
Subjt:  QDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  PRACTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein6.0e-13466.11Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA
        SQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA

Query:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein6.0e-13466.11Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA
        SQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA

Query:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein1.0e-9365.27Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein7.1e-3433.44Show/hide
Query:  KIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVD-------PRLFEYSDKDTPNEKNTIVFRLHV
        KI++ +LK+D  +F++   D S+ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL  
Subjt:  KIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVD-------PRLFEYSDKDTPNEKNTIVFRLHV

Query:  RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATA
        +C   +  L  TS+ L            +D +V+   P  +T  S   D+           +   II+ +L  GQE++L A A KG+GK HAKWSP AT 
Subjt:  RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATA

Query:  WYRMLPEVVLLEDIEDELAEELK----NKCPVNVFDIEDIANGKKRATVARPRACTLCRECI-RGEAWEK--RVSLRRVKDHFIFKIESTGALPPEVLFT
         +   P++++ ED+ D L++E K       P  VF ++ +    ++  V  P A T   E I + EA  K   + +    D FIF +ESTGA+    L  
Subjt:  WYRMLPEVVLLEDIEDELAEELK----NKCPVNVFDIEDIANGKKRATVARPRACTLCRECI-RGEAWEK--RVSLRRVKDHFIFKIESTGALPPEVLFT

Query:  EAVKILEDKCE
         A+ +L+ K +
Subjt:  EAVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTAAAGGTAAGAACTTGCATAATATGTCGGAATCGGATTCCGAACAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAACCTTCCAGATGTGCCCATGAA
GCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGCATATGCTTCGTTGGGTATTG
ATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCGGCATTGACCCATCCCTCGCT
AATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTT
AGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCATGTTCGCTGTGAACGTG
GAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCGAACACAAAGCCCAAAACATAT
ACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTCAGCTCGGGTCAGGAAATTGA
ACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGACATAG
AGGATGAGTTGGCAGAAGAACTCAAAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGC
ACATTGTGCAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTCTACCTCC
AGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAACCCTAGCCAATTCCACTTCAGATACCTCGTGCCGCTTAAACCTTCCCTCTCCCGCCTAAACCCTCCTCAGCCGTGCCGTTCAGTGCCTCCGCCGTCGTCGTCATTC
TCGAATTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCTATCTTCTTCCTTCTCTTGGCCTCAGTTACAGCCGAGCCCAACGACTAGATAACTGTGTGCAAATTGAGTC
GAAGGTTTATAATGTCCGGTAAAGGTAAGAACTTGCATAATATGTCGGAATCGGATTCCGAACAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAACCTTCCAGAT
GTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGCATATGCTTC
GTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCGGCATTGACC
CATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTT
GCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCATGTTCG
CTGTGAACGTGGAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCGAACACAAAGC
CCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTCAGCTCGGGT
CAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCT
GGAAGACATAGAGGATGAGTTGGCAGAAGAACTCAAAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTC
CACGAGCTTGCACATTGTGCAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGA
GCTCTACCTCCAGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGATTTTTCCTGTCCAAAAGAGATGAACG
TGTATATTATTTCATTTTATTCGGCAGTCATCAATTTTTGTAATATAGGAGGTTTCATATTCTATTTTTCTTTTTAATTGACAGTAGAATAGTAAGTTGTGCTGATCTCT
CTTGATTCCTCCCTCCTAGATTTTATGAATGCCAACTTGGAGGTGATCGAATAAGAGAATAGACAAAGATAATGTTATTTCTTCAATGGAATTCAATTCTGTTTATTTCT
AAGGAATTCAAAGTATCTAAGATC
Protein sequenceShow/hide protein sequence
MSGKGKNLHNMSESDSEQDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLA
NAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTY
TSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRAC
TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS