; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23554 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23554
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTHO complex subunit 3
Genome locationCarg_Chr06:3408933..3412722
RNA-Seq ExpressionCarg23554
SyntenyCarg23554
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0000445 - THO complex part of transcription export complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily
IPR040132 - TREX component Tex1/THOC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065764.1 THO complex subunit 3 [Cucumis melo var. makuwa]2.0e-17798.36Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES  AFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEG
        ADEG
Subjt:  ADEG

XP_004149572.1 THO complex subunit 3 [Cucumis sativus]9.1e-18398.4Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES  AFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFES
        ADEGIFRIFGFES
Subjt:  ADEGIFRIFGFES

XP_022155009.1 THO complex subunit 3 isoform X2 [Momordica charantia]2.3e-17895.22Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+   FKNL SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVG YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFESA
Subjt:  ADEGIFRIFGFESA

XP_022946738.1 THO complex subunit 3 [Cucurbita moschata]5.1e-186100Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFESA
Subjt:  ADEGIFRIFGFESA

XP_038905145.1 THO complex subunit 3 [Benincasa hispida]4.1e-18397.77Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES P FKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFE+A
Subjt:  ADEGIFRIFGFESA

TrEMBL top hitse value%identityAlignment
A0A0A0L651 WD_REPEATS_REGION domain-containing protein4.4e-18398.4Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES  AFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFES
        ADEGIFRIFGFES
Subjt:  ADEGIFRIFGFES

A0A1S3BM38 THO complex subunit 34.4e-18398.4Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES  AFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFES
        ADEGIFRIFGFES
Subjt:  ADEGIFRIFGFES

A0A6J1DNX6 THO complex subunit 3 isoform X21.1e-17895.22Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+   FKNL SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVG YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFESA
Subjt:  ADEGIFRIFGFESA

A0A6J1G4N9 THO complex subunit 32.5e-186100Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFESA
Subjt:  ADEGIFRIFGFESA

A0A6J1KZA7 THO complex subunit 32.5e-186100Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGIFRIFGFESA
        ADEGIFRIFGFESA
Subjt:  ADEGIFRIFGFESA

SwissProt top hitse value%identityAlignment
P14197 WD repeat-containing protein AAC31.5e-6336.78Show/hide
Query:  FKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKT
        F    ++++ G+KKK  SVAWN  G K+AS   D   RVW+ +P G                +  +K+ +ELKGH  S++++ W PK++DL+A+A  DK 
Subjt:  FKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKT

Query:  VRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPI
        +++WD + GKC      + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ W+  G++  +    G +E   +       ++ +
Subjt:  VRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPI

Query:  ETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNP
        +TL  HTA  YC+  DP G Y A GSADS+VSLWDI  M+CV+TF K  +P R++SF+  G++IA++S +  I+I  ++S + +H I C + ++S+ W+P
Subjt:  ETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNP

Query:  KHNLLAYAGDDKNKYQADEGIFRIFGFES
           LLAYA  + N+   D  I R+FG+ S
Subjt:  KHNLLAYAGDDKNKYQADEGIFRIFGFES

Q29RH4 THO complex subunit 33.8e-9150.83Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V++G  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF

Query:  G
        G
Subjt:  G

Q8VE80 THO complex subunit 33.8e-9150.83Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V++G  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF

Query:  G
        G
Subjt:  G

Q96J01 THO complex subunit 35.0e-9150.83Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V++G  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIF

Query:  G
        G
Subjt:  G

Q9FKT5 THO complex subunit 35.2e-16585.71Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+T  FK+L+SREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI++VQ+GRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADEGIFRIFGFESA
          DEG+FRIFGFES+
Subjt:  QADEGIFRIFGFESA

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein6.2e-1221.25Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        V+ +A+N    +      +G +++      + +     H + C  +   P G + A GS+D+ + +WD  +  C++T+      + TI F+  G ++ S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISSVQSGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG
          D  + +  + +G+ +H+  C    + S++++P   LLA    D+     D   F + G
Subjt:  SEDLFIDISSVQSGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein4.3e-1323.12Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        ++ + ++ +  +      +GT+++      + + TL  H + C  +   P G +FA GS D+ + +WDI +  C+ T+      V  + F   G +I S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISSVQSGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG
         ED  + +  + +G+ +H+       + S++++P   LLA    DK     D   F + G
Subjt:  SEDLFIDISSVQSGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG

AT5G25150.1 TBP-associated factor 52.7e-1524.9Show/hide
Query:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGEN---
        Y+GH   V    ++  G   AS S D+TAR+W ++     +++ +  + GH   VD + W P + + IAT S DKTVRLWD + G+C +     G     
Subjt:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGEN---

Query:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSA
        +++   PDG ++A G+ D                                         GT+ +    + R I  LM H +  + ++    G   A GSA
Subjt:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSA

Query:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFNHTGEYIASAS
        D  V LWD+                +++  +RTF     PV  + F+      A+ +
Subjt:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFNHTGEYIASAS

AT5G56130.1 Transducin/WD40 repeat-like superfamily protein3.7e-16685.71Show/hide
Query:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+T  FK+L+SREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GK
Subjt:  MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI++VQ+GRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADEGIFRIFGFESA
          DEG+FRIFGFES+
Subjt:  QADEGIFRIFGFESA

AT5G67320.1 WD-40 repeat family protein9.2e-2428.62Show/hide
Query:  KKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SGENINITYKPD
        K V ++ WN  G  LA+GS D  AR+W +    +G++    L  H   +  L W+ K  D + T S D+T  +WD +  +  QQ E  SG  +++ ++ +
Subjt:  KKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SGENINITYKPD

Query:  GTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG---------YFAVG
            A  + D  + +  + + +P         EVN + W+ TG +    + + T ++        +  L  HT   Y I   P G            A  
Subjt:  GTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG---------YFAVG

Query:  SADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLA
        S DS V LWD  + +MLC  +F     PV +++F+  GEYIAS S D  I I S++ G+ V        +  V WN + N +A
Subjt:  SADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATCGACGCCGGCTTTTAAGAATCTTTACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACTGGTATGAAGCTTGCTTC
CGGTTCTGTCGATCAAACTGCTCGAGTTTGGCATATTGAGCCTCATGGACATGGTAAGGTTAAGGATGTCGAGTTGAAAGGGCATACTGATAGTGTAGATCAGCTATGTT
GGGATCCTAAACATTCTGATCTTATAGCAACCGCCTCTGGTGACAAGACGGTTCGACTATGGGATGCTCGTAATGGGAAATGCTCACAGCAAGCTGAGCTGAGTGGGGAG
AATATAAACATCACCTACAAGCCTGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACTATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAGCGCAA
GTTCAATTACGAGGTGAACGAAATTGCTTGGAACATGACTGGGGAAATGTTTTTCCTGACAACTGGAAATGGTACCGTTGAAGTACTTGCATACCCGTCACTTCGACCTA
TTGAAACTCTTATGGCTCACACAGCTGGTTGTTACTGCATTGCAATTGACCCGGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATC
TCTCAGATGCTCTGCGTGCGAACATTTACAAAACTCGAATGGCCTGTCCGAACTATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCTAGTGAGGACTTGTTCAT
TGATATATCGAGTGTTCAATCGGGACGAACGGTTCATCAGATTCCTTGTCGGGCTGCTATGAATAGTGTGGAGTGGAATCCAAAGCACAATTTGCTTGCATATGCTGGGG
ATGACAAGAACAAGTATCAGGCTGATGAAGGTATTTTTAGGATCTTTGGGTTTGAAAGTGCATGA
mRNA sequenceShow/hide mRNA sequence
AATTAATCCCCCACATAAAAAGTGGGTGTTCGTATGGAACAAAAATCCCTATAATCGCCGGATTGGAACTCGTTGAATTCCCGGCGGACATGGAGGAATCGACGCCGGCT
TTTAAGAATCTTTACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACTGGTATGAAGCTTGCTTCCGGTTCTGTCGATCAAACTGC
TCGAGTTTGGCATATTGAGCCTCATGGACATGGTAAGGTTAAGGATGTCGAGTTGAAAGGGCATACTGATAGTGTAGATCAGCTATGTTGGGATCCTAAACATTCTGATC
TTATAGCAACCGCCTCTGGTGACAAGACGGTTCGACTATGGGATGCTCGTAATGGGAAATGCTCACAGCAAGCTGAGCTGAGTGGGGAGAATATAAACATCACCTACAAG
CCTGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACTATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAGCGCAAGTTCAATTACGAGGTGAACGA
AATTGCTTGGAACATGACTGGGGAAATGTTTTTCCTGACAACTGGAAATGGTACCGTTGAAGTACTTGCATACCCGTCACTTCGACCTATTGAAACTCTTATGGCTCACA
CAGCTGGTTGTTACTGCATTGCAATTGACCCGGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATCTCTCAGATGCTCTGCGTGCGA
ACATTTACAAAACTCGAATGGCCTGTCCGAACTATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCTAGTGAGGACTTGTTCATTGATATATCGAGTGTTCAATC
GGGACGAACGGTTCATCAGATTCCTTGTCGGGCTGCTATGAATAGTGTGGAGTGGAATCCAAAGCACAATTTGCTTGCATATGCTGGGGATGACAAGAACAAGTATCAGG
CTGATGAAGGTATTTTTAGGATCTTTGGGTTTGAAAGTGCATGAGAAATGGATCCACTAGGATTCTCCATAGAATTCTACCATGGATCAACTTATCTTTATTCCCTTCTT
TTCTGGTTAGTATTAGTATTGAATTCCATTTGTATGTTATGTTACCGAGGATTTTCCTTCTTTTCGCTTGAAAGGTTCGAAGTACTTTTGTGATCTGAAAAACAATCATT
TGAGCTAGCAATGATGCTTACTTGCATTGGGGTCTTTTATCTACTTTTATTATTATTACTAGGAGATTGACTCTGGGTGAGATCCCACGTC
Protein sequenceShow/hide protein sequence
MEESTPAFKNLYSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGE
NINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDI
SQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISSVQSGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESA