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Carg23557 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23557
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionA2L_zn_ribbon domain-containing protein
Genome locationCarg_Chr06:3400994..3402999
RNA-Seq ExpressionCarg23557
SyntenyCarg23557
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596745.1 hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia]4.0e-60100Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

KAG7028282.1 hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-64100Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGEEQKKQSF
        ECGGSGLVLMDKDYFRCPECGGEEQKKQSF
Subjt:  ECGGSGLVLMDKDYFRCPECGGEEQKKQSF

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]3.0e-5595.9Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]1.5e-5495.9Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRF PTANAS RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

XP_023540547.1 uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-5495.87Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECG
        ECGGSGLVLMDKDYFRCPECG
Subjt:  ECGGSGLVLMDKDYFRCPECG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein2.0e-3368.55Show/hide
Query:  MEALL--PISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKR
        MEAL+  P+ T P         +L P ++FPL  RSNS++ RRRT  FAAIDGASL     AD TQV+ITWQI VGAIAGVTPFVVAGIEFSKRI  QKR
Subjt:  MEALL--PISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKR

Query:  CKECGGSGLVLMDKDYFRCPECGG
        CKECGGSGLVL D DYFRCPECGG
Subjt:  CKECGGSGLVLMDKDYFRCPECGG

A0A1S3BLU9 uncharacterized protein LOC1034910511.5e-3182.22Show/hide
Query:  RSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGG
        RSNS++ RRRT  FAAIDGAS   + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGG
Subjt:  RSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGG

A0A6J1DN65 uncharacterized protein LOC1110221352.0e-2862.3Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEAL PIS S FRF        +P++S P        N+R +T T AAI+ A  A+   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLM+ DYFRCP+CGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

A0A6J1FBA7 uncharacterized protein LOC1114422621.4e-5595.9Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

A0A6J1L2M2 uncharacterized protein LOC1114985377.2e-5595.9Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRF PTANAS RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein8.5e-2464.63Show/hide
Query:  RRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGG
        RR  T +A+   S  A   A+  + EITWQI+VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV  DK YFRCPECGG
Subjt:  RRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTCCGATTCCCTCCCACAGCCAATGCCAGCCTTCGTCCTGTTTCTTCTTTCCCCCTCAATCTGCGTTCAAATTCGCT
CAATAAGCGGAGACGAACGCACACGTTTGCGGCCATTGATGGCGCTTCGCTTGCAGCAGCAGCAGCAGCCGATCCCACTCAGGTTGAAATCACTTGGCAGATTGTCGTGG
GAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCAGCAAGAGGATTGTGGCTCAGAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTTTGATG
GACAAAGACTACTTCCGTTGCCCTGAATGCGGAGGCGAGGAGCAAAAGAAGCAATCGTTC
mRNA sequenceShow/hide mRNA sequence
GGTAGGTGTAAGAAACCACGTCTTTTGAAAAGATTGTGAAATGTTATTGGAATCTTCATGCAATGAATAAGTCGATGAGTTATTATTTATTGTTTATTATTTTTCTAAGC
TTACTTGTTATTCAAAATGTGAAAAAGGTGGGAAATAGGCAATGATATTCTTTCTCATGAAAATATGTTGCTCATAATCTGGAAATATGTTGAAGAGATCGATGTCGAAC
CCTGTGGTGAATGGATGAGGTAGATCAGGATCTGGAAATATGTTGCGGAGATCGATGTCGAACCCCTTCGTGAATGGATGAGGTAGCAAACCCCTTCGTGAATAAATAAT
TTTTAAGAAGTGTCGGGTAATAGGGGGGCGGGCTTGACACCACAGGTGAAGTTGGTGGTTGGCTGGTAAATGCAACGTGTCCCAAACAGATCAACAAACTATTTCCTCTT
TTATTCCCTTAATTTTCCCTCCTTTCTCCAACCGAACCATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTCCGATTCCCTCCCACAGCCAATGCCAGCCTTCGTCCT
GTTTCTTCTTTCCCCCTCAATCTGCGTTCAAATTCGCTCAATAAGCGGAGACGAACGCACACGTTTGCGGCCATTGATGGCGCTTCGCTTGCAGCAGCAGCAGCAGCCGA
TCCCACTCAGGTTGAAATCACTTGGCAGATTGTCGTGGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCAGCAAGAGGATTGTGGCTCAGAAGA
GATGTAAAGAATGTGGTGGTTCGGGGCTTGTTTTGATGGACAAAGACTACTTCCGTTGCCCTGAATGCGGAGGCGAGGAGCAAAAGAAGCAATCGTTC
Protein sequenceShow/hide protein sequence
MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLM
DKDYFRCPECGGEEQKKQSF