; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23564 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23564
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCarg_Chr16:9768451..9772550
RNA-Seq ExpressionCarg23564
SyntenyCarg23564
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015794.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.0e-156100Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

XP_022923515.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata]3.4e-15599.66Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLA SCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

XP_022965370.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita maxima]5.4e-15398.3Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKS LSFPSASSVLKTTARKPSRTLA S SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKF SPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

XP_023553095.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo]3.4e-15599.32Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNF+PKLKSS+SFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

XP_038876611.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida]1.4e-14593.88Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTL+PHASS+GL  SHGKPSNF PKLKS+LSFPSASSVLKTTA KPSRT AP CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

TrEMBL top hitse value%identityAlignment
A0A0A0L3S1 ATP-dependent Clp protease proteolytic subunit5.3e-13888.78Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL P CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDA+DSTKDIRLFINS+GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFL+PDVPDDEI+
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit5.8e-14593.54Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL P CSV MT PQTPDA++RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLVPVPERVKA+LNY E+SKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit2.9e-14493.2Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSL L NSH KPSNFYPKLKSSLSFPSA SVLK TA KPSRTLA  CSV MT PQTPD A+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit1.6e-15599.66Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLA SCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

A0A6J1HNH6 ATP-dependent Clp protease proteolytic subunit2.6e-15398.3Show/hide
Query:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKS LSFPSASSVLKTTARKPSRTLA S SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKF SPDVPDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 21.5e-5253.93Show/hide
Query:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L
Subjt:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSI
         GG +GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YGLID V+ + ++
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSI

Q3ANI8 ATP-dependent Clp protease proteolytic subunit 15.9e-5455.61Show/hide
Query:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 21.3e-5355.08Show/hide
Query:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q7V992 ATP-dependent Clp protease proteolytic subunit 18.6e-5355.08Show/hide
Query:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic8.5e-10169.44Show/hide
Query:  MELLSRCSTLIP-------HASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVF
        M  LS  S+L P       ++SS    +S  KP+N Y K    +S P     L+TT+  P R    + S+ M+  QT ++A RGAE+D MGLLLRERIVF
Subjt:  MELLSRCSTLIP-------HASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVF

Query:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG
        LG+SIDDFVADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASG
Subjt:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG

Query:  QAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEI
        QAIDVEIQA+E+MHNKNN+T II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NY EISKDP KFL+P++PDDEI
Subjt:  QAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEI

Query:  Y
        Y
Subjt:  Y

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 54.0e-4552.1Show/hide
Query:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH
        L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+H
Subjt:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH

Query:  QPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI
        QPLGGA G   D++IQA E++H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 66.1e-3837.99Show/hide
Query:  SNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI
        S +   LK+ LS   + S +K   + P   +  +   +   P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++
Subjt:  SNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI

Query:  NSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEK
        N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ + FTG P EK
Subjt:  NSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEK

Query:  VQKDIDRDRYMSPIEAVEYGLIDGVIDKD
        VQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  VQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G11750.2 CLP protease proteolytic subunit 63.6e-3836.33Show/hide
Query:  SNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTG----------------PQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQL
        S +   LK+ LS   + S +K   + PS    P  ++  +                 P  P     G   D   +L R RI+F+G  I+  VA  +ISQL
Subjt:  SNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTG----------------PQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQL

Query:  LLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN
        + L + D   DI +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  + 
Subjt:  LLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN

Query:  NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
         I R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G66670.1 CLP protease proteolytic subunit 31.1e-5047.32Show/hide
Query:  KSSLSFPSASSVLKTTARKPSRTLAPSCSVHM----TGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSS
        K+S  F   SS+  + ++ P +TL+ +  V      +  Q+P       E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFINS 
Subjt:  KSSLSFPSASSVLKTTARKPSRTLAPSCSVHM----TGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSS

Query:  GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQK
        GGS++A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K  + +I S  TG P  +++ 
Subjt:  GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQK

Query:  DIDRDRYMSPIEAVEYGLIDGVID
        D DRD +++P EA EYGLID VID
Subjt:  DIDRDRYMSPIEAVEYGLIDGVID

AT5G45390.1 CLP protease P46.0e-10269.44Show/hide
Query:  MELLSRCSTLIP-------HASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVF
        M  LS  S+L P       ++SS    +S  KP+N Y K    +S P     L+TT+  P R    + S+ M+  QT ++A RGAE+D MGLLLRERIVF
Subjt:  MELLSRCSTLIP-------HASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVF

Query:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG
        LG+SIDDFVADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASG
Subjt:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG

Query:  QAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEI
        QAIDVEIQA+E+MHNKNN+T II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NY EISKDP KFL+P++PDDEI
Subjt:  QAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEI

Query:  Y
        Y
Subjt:  Y


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGCTGTTCTACTCTGATTCCTCATGCCTCCTCTCTCGGCCTTCTCAATTCTCATGGAAAACCGTCAAATTTCTATCCAAAGCTCAAATCCAGTCT
CTCTTTTCCTTCGGCTTCATCGGTTCTCAAAACAACCGCTCGTAAGCCCTCGAGAACCCTAGCTCCGTCCTGTTCTGTTCATATGACGGGTCCACAAACGCCGGATGCCG
CTCAGAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCTGATGCTATTATCAGTCAGCTT
TTGCTCTTGGATGCGCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAG
GGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGG
TTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACT
GGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCAT
TATACCTCTCGTGCCAGTGCCAGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGCAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATAT
ACTAG
mRNA sequenceShow/hide mRNA sequence
TGTATTTCTGTATTTCTCACCCAACCAAATCCCCAAACTCATCGTCTATCAGCTTCTTCCTGGTTTCAGAGCTGAAGCAGAGCAGTGCTGCAAATCCATGGAGCTTCTTT
CACGCTGTTCTACTCTGATTCCTCATGCCTCCTCTCTCGGCCTTCTCAATTCTCATGGAAAACCGTCAAATTTCTATCCAAAGCTCAAATCCAGTCTCTCTTTTCCTTCG
GCTTCATCGGTTCTCAAAACAACCGCTCGTAAGCCCTCGAGAACCCTAGCTCCGTCCTGTTCTGTTCATATGACGGGTCCACAAACGCCGGATGCCGCTCAGAGAGGCGC
CGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCTGATGCTATTATCAGTCAGCTTTTGCTCTTGGATG
CGCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCT
ACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCT
TGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCG
AAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTG
CCAGTGCCAGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGCAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAGTTTCAAGC
GTTTCAATGTACCGTTTTCTAGGCTTTCGATTTATATGATTCACTTGTAGAATCCTATGTGTGAGCAAAGTCATGGTAAGCGGAAACCAGAAATATGCTGGAACTTGCTG
AGCTCATCACCGTCGTCTCTACTTACCAGAAGTTAAAAAGGTATTGGGAATTTGGACTCTTTTTCTATCTATGACATTATCAAATGAGCATTCTTGAGAAAGGAAAACTT
AGCATTGAATCATATTTTGTATTGGCAGTGTATATTTGTTGATTGATTCATGAATATCGTCATTTTTTTTAATCGTCATTTGGAGATACGGTGATTTAATCCTCTTATCT
CTTAATCGAAGATATTTGTCTCAACCAATTTAATTATGTTCAGGTTCTTGACATCTTGATCGAAGAAATATATCTTAATTAATTTAATTTTG
Protein sequenceShow/hide protein sequence
MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQL
LLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT
GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY