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Carg23579 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23579
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSecretory carrier-associated membrane protein
Genome locationCarg_Chr16:9678208..9679494
RNA-Seq ExpressionCarg23579
SyntenyCarg23579
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030658 - transport vesicle membrane (cellular component)
GO:0032588 - trans-Golgi network membrane (cellular component)
GO:0055038 - recycling endosome membrane (cellular component)
InterPro domainsIPR007273 - SCAMP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015780.1 Secretory carrier-associated membrane protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-32100Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

XP_022923600.1 secretory carrier-associated membrane protein 4-like [Cucurbita moschata]2.7e-32100Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

XP_022965309.1 secretory carrier-associated membrane protein 4-like [Cucurbita maxima]2.7e-32100Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

XP_023540505.1 secretory carrier-associated membrane protein 4-like [Cucurbita pepo subsp. pepo]5.6e-3093.33Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFY +HILFC+FAAIAPPVVFHGQSLTGILAAIDVFS+HVLVGIFYLIGF FFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

XP_023552124.1 secretory carrier-associated membrane protein 4-like [Cucurbita pepo subsp. pepo]3.5e-3298.67Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVG+FYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

TrEMBL top hitse value%identityAlignment
A0A0A0L3U1 Secretory carrier-associated membrane protein1.0e-2992Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFY +HI FC+FAAIAPPVVFHGQSLTGILAAIDVFS+HVLVGIFYLIGF FFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

A0A6J1ECA9 Secretory carrier-associated membrane protein1.3e-32100Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

A0A6J1FWN7 Secretory carrier-associated membrane protein6.0e-3093.33Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFY +HILFC+FAAIAPPVVFHGQSLTGILAAIDVFS HVLVGIFYLIGF FFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

A0A6J1HQN2 Secretory carrier-associated membrane protein1.3e-32100Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

A0A6J1KU50 Secretory carrier-associated membrane protein6.0e-3093.33Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        MFY +HILFC+FAAIAPPVVFHGQSLTGILAAIDVFS HVLVGIFYLIGF FFCLESLLSLWVLQKIYLYFRGNK
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

SwissProt top hitse value%identityAlignment
Q0JAI9 Secretory carrier-associated membrane protein 61.9e-2573.97Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        Y IHI FC+ AAIAPP+VFHG+SLTGILAAID FS+HV++GIFY +GFA FCLE+LLS+ VLQ++Y+YFRGNK
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

Q6Z8F5 Secretory carrier-associated membrane protein 56.6e-2673.97Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        Y +HI FCVFAAIAPPV+F G+SLTGILAAID FS H +VGIFY +GFA FCLE+L+S+WVLQK+Y+YFRG+K
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

Q9C6X2 Secretory carrier-associated membrane protein 44.3e-2578.08Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        Y IHI FC+ AAIAPP+ FHG+SLTG+LAAIDV S  +L GIFY IGF  FCLESLLSLWVLQKIYLYFRGNK
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

Q9M5P2 Secretory carrier-associated membrane protein 31.8e-2368.92Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        +FY +HI FCVFAA+APPVVF G+SL GIL AIDV S   +VGIFY IGFAFFCLES++S+WV+Q++Y+YFRG+
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN

Q9SKT3 Secretory carrier-associated membrane protein 13.1e-2369.44Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        Y  HI FCVFAA+APP++F G+SLTGIL AIDV S ++LVGIFY IGF FFCLESL+S+WV+Q++Y+YFRG+
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN

Arabidopsis top hitse value%identityAlignment
AT1G11180.1 Secretory carrier membrane protein (SCAMP) family protein6.4e-2466.22Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        +FY +HILFC+FAA+APP+VF G+SL GIL AIDV S   LVGIFY IGF  FCLES++S+WV+Q++Y+YFRG+
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN

AT1G11180.2 Secretory carrier membrane protein (SCAMP) family protein6.4e-2466.22Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        +FY +HILFC+FAA+APP+VF G+SL GIL AIDV S   LVGIFY IGF  FCLES++S+WV+Q++Y+YFRG+
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN

AT1G32050.1 SCAMP family protein3.1e-2678.08Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK
        Y IHI FC+ AAIAPP+ FHG+SLTG+LAAIDV S  +L GIFY IGF  FCLESLLSLWVLQKIYLYFRGNK
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK

AT1G61250.1 secretory carrier 31.3e-2468.92Show/hide
Query:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        +FY +HI FCVFAA+APPVVF G+SL GIL AIDV S   +VGIFY IGFAFFCLES++S+WV+Q++Y+YFRG+
Subjt:  MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN

AT2G20840.1 Secretory carrier membrane protein (SCAMP) family protein2.2e-2469.44Show/hide
Query:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN
        Y  HI FCVFAA+APP++F G+SLTGIL AIDV S ++LVGIFY IGF FFCLESL+S+WV+Q++Y+YFRG+
Subjt:  YGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTACGGGATACATATCTTATTCTGCGTTTTTGCTGCCATTGCGCCCCCAGTTGTGTTTCATGGGCAGTCATTGACGGGCATCTTAGCAGCAATTGACGTCTTCTC
TCAACATGTCTTGGTTGGGATATTCTACCTCATTGGATTTGCCTTTTTTTGCTTGGAATCACTTCTTAGTTTATGGGTTCTTCAGAAAATCTATTTGTATTTTAGGGGAA
ACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTACGGGATACATATCTTATTCTGCGTTTTTGCTGCCATTGCGCCCCCAGTTGTGTTTCATGGGCAGTCATTGACGGGCATCTTAGCAGCAATTGACGTCTTCTC
TCAACATGTCTTGGTTGGGATATTCTACCTCATTGGATTTGCCTTTTTTTGCTTGGAATCACTTCTTAGTTTATGGGTTCTTCAGAAAATCTATTTGTATTTTAGGGGAA
ACAAGTGATGAAGTGAGAAAGCTTAGCTTATTATTAAGCAACGGGCGATGTTGCAGCGGTGGTTTAAATCTTTTGGGAGTATGGTCCCTGTAATTTTAGGACGTTGGTAG
ATTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MFYGIHILFCVFAAIAPPVVFHGQSLTGILAAIDVFSQHVLVGIFYLIGFAFFCLESLLSLWVLQKIYLYFRGNK