; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23588 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23588
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSurvival motor neuron
Genome locationCarg_Chr16:9637455..9641220
RNA-Seq ExpressionCarg23588
SyntenyCarg23588
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR040424 - Survival motor neuron-like protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577733.1 hypothetical protein SDJN03_25307, partial [Cucurbita argyrosperma subsp. sororia]1.8e-11398.62Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSAS PSLNQTI SYSPSSYPISAGPQSSS ADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

KAG7015771.1 hypothetical protein SDJN02_23409 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-116100Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

XP_022923599.1 uncharacterized protein LOC111431235 [Cucurbita moschata]3.9e-116100Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

XP_022965362.1 uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima]3.4e-11296.77Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNET NTSEAKENISVEPCPISCTDFSAALYVKETEQET+EDSNLNL+GEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQ IPSY PSSYPISAGPQSSS ADGDIIKTAMDSAARAISS+KTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

XP_023551935.1 uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]3.8e-11196.31Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNE TNTSEAKENISVEPCPISCTDFSAALYVKETEQETV+DSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQ IPSY PSSYP+SAGPQSSS ADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGH GIMPQ GASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

TrEMBL top hitse value%identityAlignment
A0A5A7UCV0 Uncharacterized protein3.8e-7776.04Show/hide
Query:  FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWG
        FEV ETT+T EAKENI VE   I+CTDFS AL+V+ET++E VEDS+L     + YN LLKQYYELEEKRQKVLEQLYQCGAGGWNYQDV AGSD+G QWG
Subjt:  FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWG

Query:  TSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        TSAA QEHPVSASQPS    IPSY P+ YPI AGPQSSS  D DIIKTAMDSA RAI SS+KTVNKV   KES+ HD IMPQ G SSETDL TVLNAWYS
Subjt:  TSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYL+EQS AKK
Subjt:  AGFYTGKYLVEQSQAKK

A0A5D3CJX0 Survival motor neuron3.8e-7776.04Show/hide
Query:  FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWG
        FEV ETT+T EAKENI VE   I+CTDFS AL+V+ET++E VEDS+L     + YN LLKQYYELEEKRQKVLEQLYQCGAGGWNYQDV AGSD+G QWG
Subjt:  FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWG

Query:  TSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        TSAA QEHPVSASQPS    IPSY P+ YPI AGPQSSS  D DIIKTAMDSA RAI SS+KTVNKV   KES+ HD IMPQ G SSETDL TVLNAWYS
Subjt:  TSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYL+EQS AKK
Subjt:  AGFYTGKYLVEQSQAKK

A0A6J1E6W0 uncharacterized protein LOC1114312351.9e-116100Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

A0A6J1HK48 uncharacterized protein LOC111465241 isoform X21.6e-11296.77Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNET NTSEAKENISVEPCPISCTDFSAALYVKETEQET+EDSNLNL+GEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQ IPSY PSSYPISAGPQSSS ADGDIIKTAMDSAARAISS+KTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVEQSQAKK
        AGFYTGKYLVEQSQAKK
Subjt:  AGFYTGKYLVEQSQAKK

A0A6J1HLH3 uncharacterized protein LOC111465241 isoform X13.5e-10794.79Show/hide
Query:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
        MFEVNET NTSEAKENISVEPCPISCTDFSAALYVKETEQET+EDSNLNL+GEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW
Subjt:  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQW

Query:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
        GTSAAYQEHPVSASQPSLNQ IPSY PSSYPISAGPQSSS ADGDIIKTAMDSAARAISS+KTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS
Subjt:  GTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYS

Query:  AGFYTGKYLVE
        AGFYTGK +++
Subjt:  AGFYTGKYLVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGA
GACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTC
TAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCA
GTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAAT
CAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGG
GTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCAGGCCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ACAATCCACTCCCTTTGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGATGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTG
AAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAACATTTTGAGGAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCAT
TTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTC
TATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTATTGCATCTTGAGAGAACAGG
AGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTAT
ATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCA
AGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGA
AATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGC
TGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGA
AAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAA
TACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATTTGTGTGCTATGAGTTTGAAT
TTTGATCTAAATGAGTTTGAATTTGGCGTTTTTTAGAATTTTGATCAAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGT
TGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGCTGACC
CATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTTTCGACCAAGAGGTAAGATGTTCAAATCTTTTCATTCCATGTGTTATTGAATGA
Protein sequenceShow/hide protein sequence
MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHP
VSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK