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Carg23589 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23589
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:9635371..9635745
RNA-Seq ExpressionCarg23589
SyntenyCarg23589
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577733.1 hypothetical protein SDJN03_25307, partial [Cucurbita argyrosperma subsp. sororia]5.2e-22100Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

KAG7015770.1 hypothetical protein SDJN02_23408, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-22100Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

XP_022923599.1 uncharacterized protein LOC111431235 [Cucurbita moschata]4.4e-2196.23Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDRV+WDDSMIV+AMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

XP_023551933.1 uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo]4.4e-2196.23Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDR+YWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVF GCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

XP_023551935.1 uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]4.4e-2196.23Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDR+YWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVF GCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

TrEMBL top hitse value%identityAlignment
A0A0A0L6D7 Uncharacterized protein6.6e-1580.39Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDE
        M LD++YWDDSMIVKAMDEAM KYK MHG+EV RVS+EGGGV  GCGKSDE
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDE

A0A1S4DXH8 uncharacterized protein LOC103490751 isoform X11.2e-1378.43Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDE
        M LD++YWD+SMIVKAMDEAMLKYK MHG+EV  VSAEGGGV   CGKSDE
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDE

A0A6J1E6W0 uncharacterized protein LOC1114312352.1e-2196.23Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDRV+WDDSMIV+AMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

A0A6J1HK48 uncharacterized protein LOC111465241 isoform X26.2e-2192.45Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDR+YWDDSMIVKAMDEAMLKYKTMHGY++RRVSAEGGGVF GCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

A0A6J1HLH3 uncharacterized protein LOC111465241 isoform X16.2e-2192.45Show/hide
Query:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR
        MELDR+YWDDSMIVKAMDEAMLKYKTMHGY++RRVSAEGGGVF GCGKSDEPR
Subjt:  MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAGATAGAGTGTACTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCAATGTTGAAGTATAAGACAATGCATGGATATGAAGTCCGCCGTGTTTCAGC
CGAGGGAGGAGGCGTTTTTAAGGGTTGCGGTAAGAGTGACGAACCAAGA
mRNA sequenceShow/hide mRNA sequence
AGGTTTTTCTTTGGTTCTTCTTCGGTTCTTCTTCAATCGCATCAATCTTAGAATTCAGTCGAGAATATGGAGCTAGATAGAGTGTACTGGGATGATTCCATGATTGTCAA
AGCCATGGATGAAGCAATGTTGAAGTATAAGACAATGCATGGATATGAAGTCCGCCGTGTTTCAGCCGAGGGAGGAGGCGTTTTTAAGGGTTGCGGTAAGAGTGACGAAC
CAAGA
Protein sequenceShow/hide protein sequence
MELDRVYWDDSMIVKAMDEAMLKYKTMHGYEVRRVSAEGGGVFKGCGKSDEPR