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Carg23593 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23593
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:9601665..9602547
RNA-Seq ExpressionCarg23593
SyntenyCarg23593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577729.1 Lysine-specific demethylase, partial [Cucurbita argyrosperma subsp. sororia]6.0e-3194.59Show/hide
Query:  MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQ
        MGAVRTHSHVATTTTMMILEGNPSRY AIYPAV GQPYLQQQQLCFK  QRDNILGLVFLWWGQKAKRCCSQSQ
Subjt:  MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQ
KAG7015766.1 hypothetical protein SDJN02_23404, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-45100Show/hide
Query:  MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQASKINNPLMEHKLQV
        MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQASKINNPLMEHKLQV
Subjt:  MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQASKINNPLMEHKLQV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCCGTTCGCACTCACTCACATGTGGCGACAACGACGACGATGATGATTCTTGAGGGTAACCCGAGTCGGTACTGGGCCATTTATCCCGCCGTCCTGGGACAACC
TTATCTGCAGCAGCAGCAGCTCTGCTTTAAGCAGCGACAGAGAGACAATATTTTGGGTCTCGTATTCTTGTGGTGGGGGCAAAAGGCAAAGCGCTGCTGCTCCCAGTCCC
AGGCTTCAAAAATTAACAACCCACTGATGGAACATAAGTTACAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCCGTTCGCACTCACTCACATGTGGCGACAACGACGACGATGATGATTCTTGAGGGTAACCCGAGTCGGTACTGGGCCATTTATCCCGCCGTCCTGGGACAACC
TTATCTGCAGCAGCAGCAGCTCTGCTTTAAGCAGCGACAGAGAGACAATATTTTGGGTCTCGTATTCTTGTGGTGGGGGCAAAAGGCAAAGCGCTGCTGCTCCCAGTCCC
AGGCTTCAAAAATTAACAACCCACTGATGGAACATAAGTTACAAGTTTGA
Protein sequenceShow/hide protein sequence
MGAVRTHSHVATTTTMMILEGNPSRYWAIYPAVLGQPYLQQQQLCFKQRQRDNILGLVFLWWGQKAKRCCSQSQASKINNPLMEHKLQV