; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23610 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23610
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationCarg_Chr20:4583614..4587570
RNA-Seq ExpressionCarg23610
SyntenyCarg23610
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571164.1 hypothetical protein SDJN03_30079, partial [Cucurbita argyrosperma subsp. sororia]2.7e-7999.36Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRT+HKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-80100Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]6.1e-7998.73Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRT+HKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

XP_022986629.1 uncharacterized protein LOC111484314 [Cucurbita maxima]8.8e-7897.45Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAAC APSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSR+NHKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.8e-7898.09Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFGQ PKLAIQRKCSRTNHKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983951.0e-7189.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TP+VPV EA+PEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM

A0A5D3CQ66 Uncharacterized protein1.0e-7189.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TP+VPV EA+PEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPV-EADPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172732.3e-7191.08Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RTN KLSVRAEYND GR GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KIGQLNSAIDNVSSRLRGGN TP+VPVEADPE EATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488973.0e-7998.73Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRT+HKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843144.3e-7897.45Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
        MAAC APSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSR+NHKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRR

Query:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM
        ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  ARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.6.4e-1841.48Show/hide
Query:  SISFGQAPKLAIQRKCSRTNHKLSVRAEY-NDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDD--GLEKTRQTLNEK
        S+SFG      +     RT   L++++ Y +D G    G FV GF+LGG + G L  ++APQI ++I   D     R      YD+   LEKTR+ L EK
Subjt:  SISFGQAPKLAIQRKCSRTNHKLSVRAEY-NDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDD--GLEKTRQTLNEK

Query:  IGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEAT
        I QLNSAID+VSS+L+    TP+    +  EIEAT
Subjt:  IGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEAT

AT3G02900.1 unknown protein5.6e-3854.88Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFR
        MA+  A  +S SG     +  +  +I   ++  L +Q K +R +HKLSV A Y  G + GG  +FV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF+
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFR

Query:  RARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGG-------NKTPSVPVEADPEIEAT
        +  +P+YYD+GLE+ R+ LNEKIGQLNSAID VSSRL+GG         +PSVPVE D E EAT
Subjt:  RARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGG-------NKTPSVPVEADPEIEAT

AT3G02900.2 unknown protein1.9e-3863.36Show/hide
Query:  LAIQRKCSRTNHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNV
        L +Q K +R +HKLSV A Y  G + GG  +FV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++  +P+YYD+GLE+ R+ LNEKIGQLNSAID V
Subjt:  LAIQRKCSRTNHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNV

Query:  SSRLRGG-------NKTPSVPVEADPEIEAT
        SSRL+GG         +PSVPVE D E EAT
Subjt:  SSRLRGG-------NKTPSVPVEADPEIEAT

AT5G16660.1 unknown protein2.6e-4361.9Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILN
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I +K +RT  K SV A Y DG R+G  G+F+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILN

Query:  -EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPS---VPVEADPEIEAT
         EDEYGF + ++P YYD+GLEKTR+TLNEKIGQLNSAIDNVSSRLRG  K  S   VPVE DPE+EAT
Subjt:  -EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPS---VPVEADPEIEAT

AT5G16660.2 unknown protein4.1e-4161.31Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILN
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I +K +RT  K SV A   DG R+G  G+F+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILN

Query:  -EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPS---VPVEADPEIEAT
         EDEYGF + ++P YYD+GLEKTR+TLNEKIGQLNSAIDNVSSRLRG  K  S   VPVE DPE+EAT
Subjt:  -EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPS---VPVEADPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCA
GAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGT
CTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCATCTGTGCCAGT
TGAAGCGGATCCGGAGATAGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCA
GAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGT
CTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCATCTGTGCCAGT
TGAAGCGGATCCGGAGATAGAAGCTACCATGTAAATACAGTTTCTAGTTGCACAGGTTTGAAGTTTCTACTTCTTAGATACCATATATCCATGTGACAATATGCCACAAT
TTTTAATTGAAAGAATTTGGTATTGATCCAAGTTAAAATGGATCGATATAGTTTTTATGGATAAGTTCCCGACCATACCTGGGTTGAGTTGAGTTCGAGTAATCTTTTGG
ATAAGTT
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDG
LEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM