; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23622 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23622
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationCarg_Chr20:4484941..4487088
RNA-Seq ExpressionCarg23622
SyntenyCarg23622
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571147.1 B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia]6.8e-214100Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

KAG7010958.1 B3 domain-containing transcription factor VRN1 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-214100Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

XP_022943958.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata]1.3e-21299.46Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRK DSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

XP_023512691.1 B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo subsp. pepo]2.0e-21399.73Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

XP_023512692.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita pepo subsp. pepo]2.0e-21399.73Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

TrEMBL top hitse value%identityAlignment
A0A6J1D3D4 B3 domain-containing transcription factor VRN1-like isoform X22.5e-20193.48Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELS VATLTVPDGHVWRVGLRK DNKFWFEDGWHGFLEHYSIRVGY LVFRYEGNS+FCVF+FNLNTSEINYQSAALGGNQRNNYSIQNRIFEE+E
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPE IPSNQSMNSGSLRNKLFGDEWN HQSK+ASTLQAEYLSTRDIGVQFSA+EVKKSADEVRFQNLGDDVHR+KKSG KKRK+DSSEHHPS+ HSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAIN+AKAFEP NPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRV+E+ GR+ NPNP S MNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

A0A6J1FUG6 B3 domain-containing transcription factor VRN1-like isoform X16.2e-21399.46Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRK DSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

A0A6J1FXJ1 B3 domain-containing transcription factor VRN1-like isoform X26.2e-21399.46Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRK DSSEHHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

A0A6J1J7V4 B3 domain-containing transcription factor VRN1-like isoform X12.0e-21198.91Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPS QSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSS+HHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPN T TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

A0A6J1JGU7 B3 domain-containing transcription factor VRN1-like isoform X22.0e-21198.91Show/hide
Query:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
        MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE
Subjt:  MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELE

Query:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE
        DYDIPEAIPS QSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSS+HHPSSAHSE
Subjt:  DYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSE

Query:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
        DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ
Subjt:  DLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQ

Query:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
        GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPN T TMNPPPLRSVTQIKLIRN
Subjt:  GWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

SwissProt top hitse value%identityAlignment
Q2QMT7 B3 domain-containing protein Os12g05914007.8e-1126.15Show/hide
Query:  LSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDYDIP
        +SGVA L VPDG  + V + K  N+  F  GW  F   Y +  G +L F Y GNS F V IFN +  E       +  +  ++   Q+   E +      
Subjt:  LSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDYDIP

Query:  EAIPSNQSMNSGSLRNKLFGDEWNPHQSK---SASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGD-----DVHRIKKSGGKKRKLDSSEHHPSSA
           PS   M+  +    L  D+   +  K   S S ++ E      I  +F+A    K  ++VR +   D     D+     SGG ++   S    P   
Subjt:  EAIPSNQSMNSGSLRNKLFGDEWNPHQSK---SASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGD-----DVHRIKKSGGKKRKLDSSEHHPSSA

Query:  HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKL-QTPDGRQWPVRC-LYKVGR
                    Y   SA++  V A E        K  +P  P     +  + +  G +++    +A + L   +  IKL Q+   + W +   +     
Subjt:  HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKL-QTPDGRQWPVRC-LYKVGR

Query:  AKLSQGWYEFCLENNLGEGDVCVFE
          LS GW +F   N L EGD+CVFE
Subjt:  AKLSQGWYEFCLENNLGEGDVCVFE

Q84R27 B3 domain-containing protein At3g189601.9e-0940.28Show/hide
Query:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY
        +LS V TL  P G    + L+++  + WF +GW  F E +SI  G+ L+F Y+ NS+F V IFN++  E  Y
Subjt:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY

Q8L3W1 B3 domain-containing transcription factor VRN11.7e-9558.04Show/hide
Query:  RDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDY
        +DELS    LTVPDGHVWRVGLRK DNK WF+DGW  F++ YSIR+GYLL+FRYEGNSAF V+IFNL+ SEINY S  L  +  N++  + R+FE+LED 
Subjt:  RDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDY

Query:  DIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDL
        D     PS  S+    L       E     +K  ++   + L T  +            A+E           +I K  G+K+K    E   SSA  +D 
Subjt:  DIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDL

Query:  GDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGW
         + R +FYESASARKRTVTAEERERAIN+AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIK+Q  + +QWPVRCLYK GRAK SQGW
Subjt:  GDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGW

Query:  YEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME
        YEF LENNLGEGDVCVFELLR R+ VLKVT FRV E
Subjt:  YEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME

Q9XIB5 B3 domain-containing protein REM191.0e-5867.25Show/hide
Query:  QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKN
        ++  ++  ++ K  G+K+K  + E   SS    D  + R +FYESASARKRTVTAEERERA+N+AK FEP NP+ RVVLRPSYLYRGCIMYLPS FAEK 
Subjt:  QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKN

Query:  LSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME
        LSG+SGFIKLQ  + +QWPVRCLYK GRAK SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Subjt:  LSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME

Q9ZSH7 B3 domain-containing protein At4g015802.3e-1041.67Show/hide
Query:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY
        +LS V TL  P G+   + L+++  + WF +GW  F E +SI  G+ L+F Y+ NS+F V IFN +  E NY
Subjt:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein6.8e-1038.89Show/hide
Query:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY
        +L+   TL  P G    + ++++ ++ WFE GW  F E +S+  G+ L F YEG+S F V IF+++ SEI Y
Subjt:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY

AT1G49480.1 related to vernalization1 17.1e-6067.25Show/hide
Query:  QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKN
        ++  ++  ++ K  G+K+K  + E   SS    D  + R +FYESASARKRTVTAEERERA+N+AK FEP NP+ RVVLRPSYLYRGCIMYLPS FAEK 
Subjt:  QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKN

Query:  LSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME
        LSG+SGFIKLQ  + +QWPVRCLYK GRAK SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Subjt:  LSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME

AT3G18960.1 AP2/B3-like transcriptional factor family protein1.4e-1040.28Show/hide
Query:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY
        +LS V TL  P G    + L+++  + WF +GW  F E +SI  G+ L+F Y+ NS+F V IFN++  E  Y
Subjt:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY

AT3G18990.1 AP2/B3-like transcriptional factor family protein1.2e-9658.04Show/hide
Query:  RDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDY
        +DELS    LTVPDGHVWRVGLRK DNK WF+DGW  F++ YSIR+GYLL+FRYEGNSAF V+IFNL+ SEINY S  L  +  N++  + R+FE+LED 
Subjt:  RDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDY

Query:  DIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDL
        D     PS  S+    L       E     +K  ++   + L T  +            A+E           +I K  G+K+K    E   SSA  +D 
Subjt:  DIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDL

Query:  GDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGW
         + R +FYESASARKRTVTAEERERAIN+AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIK+Q  + +QWPVRCLYK GRAK SQGW
Subjt:  GDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGW

Query:  YEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME
        YEF LENNLGEGDVCVFELLR R+ VLKVT FRV E
Subjt:  YEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME

AT4G01580.1 AP2/B3-like transcriptional factor family protein1.6e-1141.67Show/hide
Query:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY
        +LS V TL  P G+   + L+++  + WF +GW  F E +SI  G+ L+F Y+ NS+F V IFN +  E NY
Subjt:  ELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTACTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTG
GCATGGATTTCTTGAGCATTACTCCATACGGGTTGGGTACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAA
TAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAGGAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCC
AATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGCTATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCG
TGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAA
AGCGAAAACTTGATTCTAGCGAGCACCATCCATCATCTGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTG
ACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAAT
GTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTG
GTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAA
GTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAATGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACCCAGATTAAGCTGATCAG
AAACTAA
mRNA sequenceShow/hide mRNA sequence
AAAGACCTCTCCAATTGGAAAGGAGAGTTGAAAGCTATAGTGATGAAATAAGGGGAGCATTTACGCTAAGTCACAACCATGTTAATTATAGCGTGGGAGTTCATTTTTTG
GAAGATTCTTATATTTCTTTCTTGTCAGATGCTCTCCAGCAGTAGGCTCTTATAAAATTCTTCGAAAGATGTTTTGTTTCATTTTGAAAGGTAGACCTCCATTGGTGTGT
GAGAATAAAAGCTTTGGATCTTTTGGGGTTGTTTGTTTCTTATAATGCAGTCTATGCCGTCATTTACTTTTACTTGGTTCTTTTATGCTGGGCTTTCCTTTCTTTGCATT
GCCCTTTTGTTCATCATTTTTTTTTATCTCTGATGGAAAATATCTGTGTGGTTGGCTACGGAAACTTTATAGAACTCCTTTGTGTCTTTAATCATAAATCAAGTGTTATA
TTCCTTTTTCAATAAGGCAACATTTCCCTTTGAATCAGCCTGCTGAATGATCATACCACTGCAGTCGTCTTGTCAGATATGTTCTATTTGTTGGAATGGAGTTAAGTTTC
TATATTATCAATCATTTGTGTGACCCCCATCACTGGTCAATATTTACAGAGAATCCCAGAAACTTTTGTCAGGATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTA
CTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCCATACGGGTTGGG
TACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAG
GAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGC
TATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCGTGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAA
AAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAAAGCGAAAACTTGATTCTAGCGAGCACCATCCATCATC
TGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAA
AAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGT
GGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTG
CCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAA
TGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACCCAGATTAAGCTGATCAGAAACTAATACACTCCATATTTCCAGGTTACCCTACTG
TATCAAACCTCTTTCTTTCTTTCTTTCTTTCTTTGTGGTAGCCTGTTGTTTCTGATCTGTTCTTGTGGAATTAGCTGTTGTTTGATGTTCATAATCTTTCCAGGTTGACA
AAAAAAAGGATCCATTTAGAGTTTACGTTCCAAAAAGCTGTATTGACTTTAGTTGTATATAGATTTTCAAATTTTTGTTGATATCAATGGAGACCGTGTTTGTTTTT
Protein sequenceShow/hide protein sequence
MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDYDIPEAIPS
NQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTV
TAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLK
VTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN