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Carg23681 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23681
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAnaphase-promoting complex subunit 6-like isoform X1
Genome locationCarg_Chr03:3150846..3151907
RNA-Seq ExpressionCarg23681
SyntenyCarg23681
Gene Ontology termsGO:0005637 - nuclear inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603466.1 BTB/POZ and MATH domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.8e-45100Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
KAG7033650.1 hypothetical protein SDJN02_03374 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-45100Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
XP_022950860.1 uncharacterized protein LOC111453832 [Cucurbita moschata]1.7e-4295Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSI LLL SILSLFLVF AA DTAIKSIDLEHPAEDIFPSSLSGGSD+QCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
XP_022978154.1 uncharacterized protein LOC111478218 [Cucurbita maxima]4.2e-4191Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSI LLL SI+SLFLVF AA DTAIKSIDLEHPAED+FPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHT  G+CFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
XP_023543452.1 uncharacterized protein LOC111803333 [Cucurbita pepo subsp. pepo]1.8e-4499Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSIVLLLFSILSLFLVFRAA DTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
TrEMBL top hitse value%identityAlignment
A0A1S3B4R2 uncharacterized protein LOC103486012 isoform X22.3e-3277.23Show/hide
Query:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH
        MAASSS  I +LLL SILS  L+  A  DTAIKSI+LEHPAED+FPSSL G  DI+CDRVRI+G+SRLKLGSFASSFR+TAVPSV IPERQHTKI VCFH
Subjt:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH

Query:  W
        W
Subjt:  W
A0A1S4DUB8 uncharacterized protein LOC103486012 isoform X12.3e-3277.23Show/hide
Query:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH
        MAASSS  I +LLL SILS  L+  A  DTAIKSI+LEHPAED+FPSSL G  DI+CDRVRI+G+SRLKLGSFASSFR+TAVPSV IPERQHTKI VCFH
Subjt:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH

Query:  W
        W
Subjt:  W
A0A5D3DU95 Putative transmembrane protein2.3e-3277.23Show/hide
Query:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH
        MAASSS  I +LLL SILS  L+  A  DTAIKSI+LEHPAED+FPSSL G  DI+CDRVRI+G+SRLKLGSFASSFR+TAVPSV IPERQHTKI VCFH
Subjt:  MAASSSVSI-VLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH

Query:  W
        W
Subjt:  W
A0A6J1GGY2 uncharacterized protein LOC1114538328.3e-4395Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSI LLL SILSLFLVF AA DTAIKSIDLEHPAEDIFPSSLSGGSD+QCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
A0A6J1ITB9 uncharacterized protein LOC1114782182.0e-4191Show/hide
Query:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
        MAASSSVSI LLL SI+SLFLVF AA DTAIKSIDLEHPAED+FPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHT  G+CFHW
Subjt:  MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28760.1 Uncharacterized conserved protein (DUF2215)3.2e-0735.05Show/hide
Query:  ASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH
        +SS + +   ++ +L L +    +   A+KS+    PA +I   S        C+R++++G SR KLG FA+S R+  VP   IPE+ H KI VC H
Subjt:  ASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTTCATCCTCCGTTTCCATCGTCCTCCTTCTCTTTTCCATCCTTTCTTTGTTCCTCGTCTTCCGTGCAGCTGCCGACACCGCCATCAAGAGTATTGACCTCGA
GCACCCAGCTGAGGATATCTTTCCATCTTCACTTTCTGGAGGCAGTGATATACAATGTGATCGTGTTCGGATTGCTGGTCTTTCAAGATTAAAACTTGGAAGCTTTGCCA
GTTCTTTTCGAATCACTGCAGTTCCATCTGTTGCTATTCCTGAAAGACAACATACCAAAATTGGGGTTTGTTTTCACTGGTAG
mRNA sequenceShow/hide mRNA sequence
TATCACAAACCATGGAGATGAAGCTCCAAAGAAATTCAAATCCACAGACCGCCATATTCTCTCGCTCTTGGGCAGAAACTCCATACGCAAGTTCAGCCAATTCCTGCAGC
GATTATGGCCGCTTCATCCTCCGTTTCCATCGTCCTCCTTCTCTTTTCCATCCTTTCTTTGTTCCTCGTCTTCCGTGCAGCTGCCGACACCGCCATCAAGAGTATTGACC
TCGAGCACCCAGCTGAGGATATCTTTCCATCTTCACTTTCTGGAGGCAGTGATATACAATGTGATCGTGTTCGGATTGCTGGTCTTTCAAGATTAAAACTTGGAAGCTTT
GCCAGTTCTTTTCGAATCACTGCAGTTCCATCTGTTGCTATTCCTGAAAGACAACATACCAAAATTGGGGTTTGTTTTCACTGGTAG
Protein sequenceShow/hide protein sequence
MAASSSVSIVLLLFSILSLFLVFRAAADTAIKSIDLEHPAEDIFPSSLSGGSDIQCDRVRIAGLSRLKLGSFASSFRITAVPSVAIPERQHTKIGVCFHW