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Carg23687 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23687
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:2424137..2425733
RNA-Seq ExpressionCarg23687
SyntenyCarg23687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583604.1 hypothetical protein SDJN03_19536, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3384.54Show/hide
Query:  MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSF
        MREQLTH  EETRAHGATRGTLRLATLSSMVCILALLP  FSQFPDVDTWCARIRFFVPLFSGSRRIG P      LFLRFSAAPSPLSLF+  S F
Subjt:  MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSF
KAG7019307.1 hypothetical protein SDJN02_18267, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-84100Show/hide
Query:  MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSFCLS
        MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSFCLS
Subjt:  MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSFCLS

Query:  PRSIPLSFTPFNASNFTNTSRLPYETPLSHLYLRRVESLSLNHAPVGAAESFGAVNHASIY
        PRSIPLSFTPFNASNFTNTSRLPYETPLSHLYLRRVESLSLNHAPVGAAESFGAVNHASIY
Subjt:  PRSIPLSFTPFNASNFTNTSRLPYETPLSHLYLRRVESLSLNHAPVGAAESFGAVNHASIY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGAGCAGCTCACACACTTAGGAGAGGAAACTCGTGCTCATGGTGCGACACGTGGCACACTCAGATTGGCGACTTTAAGTTCCATGGTGTGCATTCTAGCCCTGCT
CCCATTTCAATTTTCGCAATTTCCTGATGTTGACACGTGGTGCGCTCGAATTAGATTCTTTGTCCCCTTGTTCTCGGGTTCAAGACGCATTGGGTACCCGCGGGCACAGC
TAAGCGATCTCTTTCTCCGATTCTCCGCCGCCCCCAGTCCTCTATCACTGTTCGCCGGTAAGAGTTCCTTTTGTCTTTCCCCAAGAAGCATTCCGCTATCCTTCACTCCC
TTCAACGCCTCTAATTTCACCAATACATCGAGATTACCCTATGAAACACCACTTTCTCACCTTTACCTCAGAAGAGTTGAGTCATTATCTCTTAATCATGCACCCGTTGG
CGCCGCTGAATCTTTTGGAGCAGTCAATCATGCATCTATTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGAGCAGCTCACACACTTAGGAGAGGAAACTCGTGCTCATGGTGCGACACGTGGCACACTCAGATTGGCGACTTTAAGTTCCATGGTGTGCATTCTAGCCCTGCT
CCCATTTCAATTTTCGCAATTTCCTGATGTTGACACGTGGTGCGCTCGAATTAGATTCTTTGTCCCCTTGTTCTCGGGTTCAAGACGCATTGGGTACCCGCGGGCACAGC
TAAGCGATCTCTTTCTCCGATTCTCCGCCGCCCCCAGTCCTCTATCACTGTTCGCCGGTAAGAGTTCCTTTTGTCTTTCCCCAAGAAGCATTCCGCTATCCTTCACTCCC
TTCAACGCCTCTAATTTCACCAATACATCGAGATTACCCTATGAAACACCACTTTCTCACCTTTACCTCAGAAGAGTTGAGTCATTATCTCTTAATCATGCACCCGTTGG
CGCCGCTGAATCTTTTGGAGCAGTCAATCATGCATCTATTTACTGA
Protein sequenceShow/hide protein sequence
MREQLTHLGEETRAHGATRGTLRLATLSSMVCILALLPFQFSQFPDVDTWCARIRFFVPLFSGSRRIGYPRAQLSDLFLRFSAAPSPLSLFAGKSSFCLSPRSIPLSFTP
FNASNFTNTSRLPYETPLSHLYLRRVESLSLNHAPVGAAESFGAVNHASIY