; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23698 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23698
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionrecQ-mediated genome instability protein 2
Genome locationCarg_Chr13:2276953..2279553
RNA-Seq ExpressionCarg23698
SyntenyCarg23698
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0033045 - regulation of sister chromatid segregation (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016607 - nuclear speck (cellular component)
InterPro domainsIPR032245 - RecQ-mediated genome instability protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]4.5e-5482.09Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQL DAR  PS+  ATL GILFQRAWLQGILV VD++NGKLILDDGTGTVELSL  +F  RPWSLGMYVMVVGA++ RTNEP  I+VH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]5.3e-5581.34Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALK+LC QL  AR  PS +AATLGGILFQRAWLQGILV VD+ N +L+LDDGTGTVELSLS DFR RPW+LGMYVMVVGA+V+R NEP II VH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF

XP_022964663.1 uncharacterized protein LOC111464675 isoform X1 [Cucurbita moschata]7.6e-70100Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS

XP_022970350.1 uncharacterized protein LOC111469342 [Cucurbita maxima]8.4e-6998.52Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDY+LAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]6.0e-5985.93Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQL DARQ+P+NNAATLGGILFQRAWLQG LV VD++N KLILDDGTGTVELSLS DFR RPW LGMYVMVVGA+V RTNEP +IAVH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLS FP REAMWYLEV+EAYKMFYEPL+EEFS
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS

TrEMBL top hitse value%identityAlignment
A0A1S3CGI5 recQ-mediated genome instability protein 22.2e-5482.09Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQL DAR  PS+  ATL GILFQRAWLQGILV VD++NGKLILDDGTGTVELSL  +F  RPWSLGMYVMVVGA++ RTNEP  I+VH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF

A0A5A7UD07 RecQ-mediated genome instability protein 22.2e-5482.09Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQL DAR  PS+  ATL GILFQRAWLQGILV VD++NGKLILDDGTGTVELSL  +F  RPWSLGMYVMVVGA++ RTNEP  I+VH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X12.6e-5581.34Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALK+LC QL  AR  PS +AATLGGILFQRAWLQGILV VD+ N +L+LDDGTGTVELSLS DFR RPW+LGMYVMVVGA+V+R NEP II VH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEF

A0A6J1HLJ4 uncharacterized protein LOC111464675 isoform X13.7e-70100Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS

A0A6J1I0C8 uncharacterized protein LOC1114693424.1e-6998.52Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
        MDY+LAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS

SwissProt top hitse value%identityAlignment
A5PJU7 RecQ-mediated genome instability protein 25.8e-0432.81Show/hide
Query:  LKLLCRQL-NDARQAPSN---NAATLG--GILFQRAWLQGILVFVDRDNGKLILDDGTGTVEL-SLSGDFRQRPWSL-GMYVMVVGAYVVRTNEPSIIAV
        +K+L  QL  DA   P +   + A +G   +  +  W+QG +  V+   G   L D +G+  +  L    R RP  + G YVMV+G     + EP + AV
Subjt:  LKLLCRQL-NDARQAPSN---NAATLG--GILFQRAWLQGILVFVDRDNGKLILDDGTGTVEL-SLSGDFRQRPWSL-GMYVMVVGAYVVRTNEPSIIAV

Query:  HKIVDLSMFPGREAMWYLEVMEAYKMFY
         K+ DLS  P  E++W LEV + ++  Y
Subjt:  HKIVDLSMFPGREAMWYLEVMEAYKMFY

Q5ZM20 RecQ-mediated genome instability protein 22.3e-0533.86Show/hide
Query:  LKLLCRQLNDARQAP------SNNAATLGGILFQRAWLQGILVFVDR-DNGKLILDDGTG-TVELSLSGDFRQRP-WSLGMYVMVVGAYVVRTNEPSIIA
        LK+L  QL  A +        S        +  +  W+QG ++ V+R   G   L DG+G    L +    R RP  S G YVMV+G     + EP + A
Subjt:  LKLLCRQLNDARQAP------SNNAATLGGILFQRAWLQGILVFVDR-DNGKLILDDGTG-TVELSLSGDFRQRP-WSLGMYVMVVGAYVVRTNEPSIIA

Query:  VHKIVDLSMFPGREAMWYLEVMEAYKM
        + K+ DLS  P  E MW LEV E +++
Subjt:  VHKIVDLSMFPGREAMWYLEVMEAYKM

Q96E14 RecQ-mediated genome instability protein 21.6e-0637.1Show/hide
Query:  LKLLCRQL-NDARQAP-----SNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSL-GMYVMVVGAYVVRTNEPSIIAVH
        LK+L  QL  DA   P     S  AA  G +     W+QG +V  DR   +L    G  +V   L    R RP  + G YVMV+G     + EP + AV 
Subjt:  LKLLCRQL-NDARQAP-----SNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSL-GMYVMVVGAYVVRTNEPSIIAVH

Query:  KIVDLSMFPGREAMWYLEVMEAYK
        K+ DLS  P  E+MW LEV + ++
Subjt:  KIVDLSMFPGREAMWYLEVMEAYK

Arabidopsis top hitse value%identityAlignment
AT1G08390.1 unknown protein9.6e-4764.23Show/hide
Query:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGK--LILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIA
        MDYSLAA+K+LC QL DA+  PS NAA+LGG+LFQRAWLQG+LV      G   L+LDDGTG +EL L+ DF  R W  GMYVMVVG Y VRT +  ++ 
Subjt:  MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGK--LILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIA

Query:  VHKIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS
        VHK+VDLS+ P REAMWYLEVM+AY++FYEPL++EFS
Subjt:  VHKIVDLSMFPGREAMWYLEVMEAYKMFYEPLVEEFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATAGCTTAGCAGCGTTGAAGCTTCTGTGCAGGCAGCTCAACGACGCCCGCCAAGCTCCGTCCAACAACGCCGCCACACTCGGCGGCATTCTCTTCCAACGCGC
CTGGCTTCAGGGGATTTTGGTCTTCGTCGACAGAGATAATGGTAAGCTGATTCTTGACGACGGCACCGGCACCGTCGAGCTCTCTCTTTCTGGCGACTTCCGCCAACGCC
CTTGGAGCCTCGGAATGTATGTGATGGTTGTTGGCGCTTATGTCGTCCGGACGAATGAACCGTCCATTATTGCGGTCCACAAGATTGTTGATCTATCAATGTTTCCTGGT
CGAGAGGCAATGTGGTACCTTGAAGTTATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAATTTTCGTAA
mRNA sequenceShow/hide mRNA sequence
AGAGAGCGAAAGAAAGAAGCGGAGAAATGGATTATAGCTTAGCAGCGTTGAAGCTTCTGTGCAGGCAGCTCAACGACGCCCGCCAAGCTCCGTCCAACAACGCCGCCACA
CTCGGCGGCATTCTCTTCCAACGCGCCTGGCTTCAGGGGATTTTGGTCTTCGTCGACAGAGATAATGGTAAGCTGATTCTTGACGACGGCACCGGCACCGTCGAGCTCTC
TCTTTCTGGCGACTTCCGCCAACGCCCTTGGAGCCTCGGAATGTATGTGATGGTTGTTGGCGCTTATGTCGTCCGGACGAATGAACCGTCCATTATTGCGGTCCACAAGA
TTGTTGATCTATCAATGTTTCCTGGTCGAGAGGCAATGTGGTACCTTGAAGTTATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAATTTTCGTAACTCATT
TTGTTGACTCAACAGGTGATGCTTACTGTATTTTCATGTTAATTAATGAAAA
Protein sequenceShow/hide protein sequence
MDYSLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTGTVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVHKIVDLSMFPG
REAMWYLEVMEAYKMFYEPLVEEFS