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Carg23699 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23699
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationCarg_Chr13:2270263..2270586
RNA-Seq ExpressionCarg23699
SyntenyCarg23699
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]6.1e-3071.17Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYR
        MSQ HKSD +KV E PK  E GDRS EE G GEA+    D  GESCRTPTSLRHRIP A+S PTTPRK+++A KRK SDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYR

Query:  VSSAKRRFTNI
        VSS+KRR T++
Subjt:  VSSAKRRFTNI

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.8e-2168.13Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCS----GESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEV
        MSQFHKSD QKV E P+ PE GDRS EE G GEA+  +    GESCRTPTS +HRIP A+S PTTPRK+++  KRKFSDQSFFE TGRGE+
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCS----GESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5098.13Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
        MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDC GESCRTPTSLRHRIPTARSYPTTPRKRK+ASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA

Query:  KRRFTNI
        KRRFTNI
Subjt:  KRRFTNI

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3071.82Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV---DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRV
        MS+F  SDHQK  EP KP EE DRSKEEDGG   +   D  GESCRTP+SL+HRIP ARS PTTPRK+K+ SKRKFSDQSFFE T R EVESLF LFYRV
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV---DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRV

Query:  SSAKRRFTNI
        SS KRR T+I
Subjt:  SSAKRRFTNI

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-51100Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
        MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSA

Query:  KRRFTNI
        KRRFTNI
Subjt:  KRRFTNI

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein1.9e-2168.89Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCS----GESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGE
        MSQFHKSD QKV E P+ PE GDRS EE G GEA+  +    GESCRTPTS +HRIP A+S PTTPRK+++  KRKFSDQSFFE TGRGE
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCS----GESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGE

A0A251NNT8 Uncharacterized protein1.3e-0643.24Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  +E D     D     +   G+ CRTPTS  H+IPT +S PTTPRK+      KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR23.0e-3071.17Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYR
        MSQ HKSD +KV E PK  E GDRS EE G GEA+    D  GESCRTPTSLRHRIP A+S PTTPRK+++A KRK SDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAV----DCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYR

Query:  VSSAKRRFTNI
        VSS+KRR T++
Subjt:  VSSAKRRFTNI

A0A6J5XJV3 Uncharacterized protein1.7e-0645.95Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  EE D + E     EA D     CRTPTS  H+IPT +S PTTPRK+      KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

M5W3L3 Uncharacterized protein (Fragment)1.3e-0643.24Show/hide
Query:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS
        +S FH  DHQ   +PP+  +E D     D     +   G+ CRTPTS  H+IPT +S PTTPRK+      KRK +   FFE TGR EVES F   +   
Subjt:  MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKR--KIASKRKFSDQSFFEVTGRGEVESLFALFYRVS

Query:  S--AKRRFTNI
        S   K+R T+I
Subjt:  S--AKRRFTNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTG
TAGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCCACCGCACGAAGCTACCCGACGACACCGAGAAAGCGGAAGATTGCGAGCAAGAGGAAATTTT
CAGATCAAAGCTTCTTCGAGGTCACCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTTTCTTCTGCCAAAAGAAGATTTACAAATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAAGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTG
TAGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCCACCGCACGAAGCTACCCGACGACACCGAGAAAGCGGAAGATTGCGAGCAAGAGGAAATTTT
CAGATCAAAGCTTCTTCGAGGTCACCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTTTCTTCTGCCAAAAGAAGATTTACAAATATATAA
Protein sequenceShow/hide protein sequence
MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCSGESCRTPTSLRHRIPTARSYPTTPRKRKIASKRKFSDQSFFEVTGRGEVESLFALFYRVSSAKRRFTNI