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Carg23701 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23701
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationCarg_Chr13:2257626..2258893
RNA-Seq ExpressionCarg23701
SyntenyCarg23701
Gene Ontology termsGO:0007346 - regulation of mitotic cell cycle (biological process)
GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV69670.1 CKS domain-containing protein [Cephalotus follicularis]4.8e-4195.45Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDD YEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_011654109.1 cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]1.5e-4298.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_016903011.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X1 [Cucumis melo]4.4e-4298.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

XP_022964884.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata]5.2e-43100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_038894383.1 cyclin-dependent kinases regulatory subunit 1 [Benincasa hispida]7.5e-4297.73Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVL P+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

TrEMBL top hitse value%identityAlignment
A0A0A0LY04 Cyclin-dependent kinases regulatory subunit7.3e-4398.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A1S4E453 Cyclin-dependent kinases regulatory subunit2.1e-4298.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

A0A1S4E4W6 Cyclin-dependent kinases regulatory subunit7.3e-4398.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A6J1HM34 Cyclin-dependent kinases regulatory subunit2.5e-43100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A6J1I3M7 Cyclin-dependent kinases regulatory subunit2.5e-43100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 18.0e-3992.59Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL P+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

O23249 Cyclin-dependent kinases regulatory subunit 18.6e-4189.53Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        MGQIQYSEKYFDD +EYRHVVL P+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

P55933 Probable cyclin-dependent kinases regulatory subunit8.3e-2880.3Show/hide
Query:  IQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        IQYSEKY+DD +EYRHV+L PDVAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  IQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 18.0e-3992.59Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL P+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 21.7e-3686.25Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL P+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 16.1e-4289.53Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        MGQIQYSEKYFDD +EYRHVVL P+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

AT2G27970.1 CDK-subunit 21.2e-3786.25Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL P+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGATCCAGTACTCTGAGAAATACTTTGATGATATCTATGAGTACAGGCATGTCGTGCTTACTCCTGATGTGGCCAAACTTCTGCCCAAGAATCGCCTTCTTTC
TGAGAATGAATGGCGAGCGATTGGGGTTCAGCAGAGCCGTGGATGGGTGCATTATGCAATTCACCGCCCAGAGCCGCACATAATGCTGTTCAGGAGGCCACTCAACTATC
AACAGCAGCAAGAGAATCAAGCTCAGCAGCAGATTCTAGCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
TCTTCGTCGCTCTTCTAAGGTCTGCGATTTTTCATCTCCCATCTCTCTCTGCGTTTTTCTTTCGATTTTGAATCTCTTTCTCTGATCTTGTTCGGATTTCTTCAGATTCA
ACAAGCGCTTGTCATCTTTCTGTCACAAATCCGGTGCGATGGGTCAGATCCAGTACTCTGAGAAATACTTTGATGATATCTATGAGTACAGGCATGTCGTGCTTACTCCT
GATGTGGCCAAACTTCTGCCCAAGAATCGCCTTCTTTCTGAGAATGAATGGCGAGCGATTGGGGTTCAGCAGAGCCGTGGATGGGTGCATTATGCAATTCACCGCCCAGA
GCCGCACATAATGCTGTTCAGGAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCTCAGCAGCAGATTCTAGCCAAGTGATAGGTTTATTATCTTTATTCTCTAG
AAACACTATATTTTGTCTAGAACACTAATGGAATCTCTCCCTACAAATCAAAAGAAGAAGAGAAAAATCAGGAAGCTCTGTGGCCCAGTGAGATCTCTGTCATAGTCATA
AGCCCTCATTGATCTTGAATTTGTGGTTTTATATTGCTTTGGTATAAAAATATGGTTTTATCCTCTCCTGTTCTTCATGGCTGCCATCAATTACTTCTGACTTTATTGTT
GAGATTCTCCTTAATGGATTATCCAATGTTATTTTCAACATTACTTGTAGGGCACAAGTATTGGAAAGAAAAATCTTGAGAATGTGAACAGAATATCACTGGTATAATCA
TCAATTATTCATATATGACCGACCCTTTTAATTTATTTTCGAAGTCTTAATTGGTTGTTTATTAATTTAACTATTTTTATTAATGTTCTAAAATGTTCATAGTTTTTTAA
CTTTTTGTGTAAACAAA
Protein sequenceShow/hide protein sequence
MGQIQYSEKYFDDIYEYRHVVLTPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK