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Carg23759 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23759
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor RAP2-7
Genome locationCarg_Chr04:1361453..1362909
RNA-Seq ExpressionCarg23759
SyntenyCarg23759
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006952 - defense response (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600096.1 Ethylene-responsive transcription factor RAP2-7, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

KAG7030768.1 Floral homeotic protein APETALA 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-51100Show/hide
Query:  MLNLNDVELSTAMKLDEIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLEDYLFRNMEDGKL
        MLNLNDVELSTAMKLDEIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLEDYLFRNMEDGKL
Subjt:  MLNLNDVELSTAMKLDEIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLEDYLFRNMEDGKL

Query:  KRVHL
        KRVHL
Subjt:  KRVHL

XP_022942116.1 ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita moschata]8.4e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

XP_023517222.1 AP2-like ethylene-responsive transcription factor SMZ isoform X1 [Cucurbita pepo subsp. pepo]8.4e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

XP_023517382.1 ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita pepo subsp. pepo]8.4e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

TrEMBL top hitse value%identityAlignment
A0A6J1FMY3 ethylene-responsive transcription factor RAP2-7-like isoform X34.1e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

A0A6J1FVM3 ethylene-responsive transcription factor RAP2-7-like isoform X24.1e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

A0A6J1JLN1 ethylene-responsive transcription factor RAP2-7-like isoform X34.1e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

A0A6J1JUN6 ethylene-responsive transcription factor RAP2-7-like isoform X14.1e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

A0A6J1JUP5 ethylene-responsive transcription factor RAP2-7-like isoform X24.1e-2484.51Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
        ++ L G    H  +RAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKL

SwissProt top hitse value%identityAlignment
B8AMA9 APETALA2-like protein 25.3e-2165.71Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRG+ ADINFN+SDY++D+KQ++N +KEEFVH+LRRQSTGF+RG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

B8AXC3 APETALA2-like protein 15.6e-2374.29Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV ADINFN+SDY+EDM+Q+K+LSKEEFVHVLRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

P47927 Floral homeotic protein APETALA 28.1e-2271.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV ADINFNI DYD+D+KQ+ NL+KEEFVHVLRRQSTGF RG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

Q2TQ34 APETALA2-like protein 15.6e-2374.29Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV ADINFN+SDY+EDM+Q+K+LSKEEFVHVLRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

Q9SK03 Ethylene-responsive transcription factor RAP2-73.7e-2271.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV+ADINF + DY+EDMKQ++NLSKEEFVH+LRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

Arabidopsis top hitse value%identityAlignment
AT2G28550.1 related to AP2.72.6e-2371.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV+ADINF + DY+EDMKQ++NLSKEEFVH+LRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

AT2G28550.2 related to AP2.72.6e-2371.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV+ADINF + DY+EDMKQ++NLSKEEFVH+LRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

AT2G28550.3 related to AP2.72.6e-2371.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV+ADINF + DY+EDMKQ++NLSKEEFVH+LRRQSTGFSRG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

AT4G36920.1 Integrase-type DNA-binding superfamily protein5.8e-2371.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV ADINFNI DYD+D+KQ+ NL+KEEFVHVLRRQSTGF RG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK

AT4G36920.2 Integrase-type DNA-binding superfamily protein5.8e-2371.43Show/hide
Query:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK
        ++ L G    H  +RAYDRAAIKFRGV ADINFNI DYD+D+KQ+ NL+KEEFVHVLRRQSTGF RG SK
Subjt:  EIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATCTTAACGATGTTGAATTATCAACTGCGATGAAACTCGACGAAATCGGACTGTGTGGTCGGACACTGCTCCATCGCTGCAGCAGGGCATATGATCGAGCAGC
GATAAAATTTAGGGGAGTTAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAACTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTC
GTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATCTTAACGATGTTGAATTATCAACTGCGATGAAACTCGACGAAATCGGACTGTGTGGTCGGACACTGCTCCATCGCTGCAGCAGGGCATATGATCGAGCAGC
GATAAAATTTAGGGGAGTTAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAACTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTC
GTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGACGAAGAATGAAA
TCGAGGAAAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGAGCCATCAATCTTGATCTAAGCATGGGAGGAAATTTTCACTACCATTTAAGAAATTCTTCCCAA
AACTCAACATTAAAAAACCAAAGTAA
Protein sequenceShow/hide protein sequence
MLNLNDVELSTAMKLDEIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLEDYLFRNMEDGKLKRVHL