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Carg23816 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23816
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 .
Genome locationCarg_Chr14:12490223..12490851
RNA-Seq ExpressionCarg23816
SyntenyCarg23816
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038944 - Outer envelope membrane protein 7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049387.1 hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa]3.4e-1680.33Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
        MKE AKLNA RSG+VVIGALAFGYLSL + FKPYLEKAQS LQHP+ EPSTI KDA+SN D
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
KAG6428064.1 hypothetical protein SASPL_112313 [Salvia splendens]9.0e-0961.02Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
        M+  AK NA+RSG+VVIGALAFGYL+LHL FKPYLEKAQ   QH  +  S+ P D  ++
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
KAG6582279.1 hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2697.1Show/hide
Query:  GRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD
        GRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQ SLQHP+SEPSTIPKDAISNRDD
Subjt:  GRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD
KAG7018683.1 hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-38100Show/hide
Query:  MANKKKKKKKTRKRKKEQKKSDYIREGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD
        MANKKKKKKKTRKRKKEQKKSDYIREGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD
Subjt:  MANKKKKKKKTRKRKKEQKKSDYIREGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD
KGN57013.1 hypothetical protein Csa_010432 [Cucumis sativus]2.5e-1988.52Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
        MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHP+ EPSTIPKDAISN D
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
TrEMBL top hitse value%identityAlignment
A0A0A0L5N1 Uncharacterized protein1.2e-1988.52Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
        MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHP+ EPSTIPKDAISN D
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
A0A4D9A3A6 Uncharacterized protein4.4e-0961.02Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
        M+  AK NA+RSG+VVIGALAFGYL+LHL FKPYLEKAQ   QH  +  S+ P D  ++
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
A0A4D9BKZ9 Uncharacterized protein8.2e-0859.32Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
        M+  AK NA+RS VVVIGALAFGYL+LHL FKPYLEKAQ   Q   +  S+ P D  ++
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISN
A0A5A7U4W2 Uncharacterized protein1.6e-1680.33Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
        MKE AKLNA RSG+VVIGALAFGYLSL + FKPYLEKAQS LQHP+ EPSTI KDA+SN D
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRD
W9R337 Uncharacterized protein4.4e-0962.75Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPST
        M++  K+NA+RSGVVV+GA+AFGYL+L+L FKP+LEKAQ S++H  S+PS+
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63160.1 FUNCTIONS IN: molecular_function unknown2.4e-0444.19Show/hide
Query:  RSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIP
        ++  VV+G LA G+L++ LVFKP  +K  SS    DS+ +T+P
Subjt:  RSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIP
AT5G19151.1 unknown protein1.1e-0754.55Show/hide
Query:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKA-------QSSLQHPDSE
        MK     NA+RS VVV+G+LAFGYLSL L +KP+LEKA       QSS QH   +
Subjt:  MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKA-------QSSLQHPDSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATAAGAAGAAGAAGAAGAAGAAGACGAGGAAGAGGAAGAAGGAGCAGAAGAAAAGTGATTACATTAGGGAGGGACGGCGGCGAAGAGAACCGATGAAGGAAGC
AGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTGGTGATCGGAGCTCTGGCCTTCGGGTATCTGAGCCTACACCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTT
CTCTTCAACATCCCGATTCTGAGCCCTCTACAATTCCAAAAGATGCTATTTCAAACCGCGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATAAGAAGAAGAAGAAGAAGAAGACGAGGAAGAGGAAGAAGGAGCAGAAGAAAAGTGATTACATTAGGGAGGGACGGCGGCGAAGAGAACCGATGAAGGAAGC
AGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTGGTGATCGGAGCTCTGGCCTTCGGGTATCTGAGCCTACACCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTT
CTCTTCAACATCCCGATTCTGAGCCCTCTACAATTCCAAAAGATGCTATTTCAAACCGCGATGATTGA
Protein sequenceShow/hide protein sequence
MANKKKKKKKTRKRKKEQKKSDYIREGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNRDD