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Carg23875 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23875
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmitoferrin-like
Genome locationCarg_Chr02:4062978..4065386
RNA-Seq ExpressionCarg23875
SyntenyCarg23875
Gene Ontology termsGO:0048250 - iron import into the mitochondrion (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005381 - iron ion transmembrane transporter activity (molecular function)
InterPro domainsIPR018108 - Mitochondrial substrate/solute carrier
IPR023395 - Mitochondrial carrier domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605395.1 Mitoferrin, partial [Cucurbita argyrosperma subsp. sororia]2.8e-33100Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

KAG7035341.1 Solute carrier family 25 member 40, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-43100Show/hide
Query:  MSEINVLLELDKGHIWGVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        MSEINVLLELDKGHIWGVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
Subjt:  MSEINVLLELDKGHIWGVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

XP_022948031.1 mitoferrin-like isoform X1 [Cucurbita moschata]2.8e-33100Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

XP_023007105.1 mitoferrin-like isoform X1 [Cucurbita maxima]1.5e-3198.57Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLN SSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

XP_023532261.1 mitoferrin-like isoform X1 [Cucurbita pepo subsp. pepo]4.4e-3197.14Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVI+TILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLN SSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

TrEMBL top hitse value%identityAlignment
A0A0A0KF81 Uncharacterized protein8.4e-2887.14Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSI DVIRTILKKDGY GLMRGWVPRMLFH PAAAICWSTYEA+KSFF DLN  SS N T
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

A0A1S3CK52 mitoferrin-like1.3e-2888.57Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSI DVIRTILKKDGY GLMRGWVPRMLFH PAAAICWSTYEA+KSFF DLN  SSDN T
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

A0A5D3C6R9 Mitoferrin-like1.3e-2888.57Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSI DVIRTILKKDGY GLMRGWVPRMLFH PAAAICWSTYEA+KSFF DLN  SSDN T
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

A0A6J1G850 mitoferrin-like isoform X11.3e-33100Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

A0A6J1L227 mitoferrin-like isoform X17.4e-3298.57Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT
        GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLN SSSDNVT
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT

SwissProt top hitse value%identityAlignment
Q0VCH6 Solute carrier family 25 member 404.3e-0543.75Show/hide
Query:  VIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS
        +++ I+ K+G+ GL  G +PR++   PA A+  STYE  KSFFQ  N+
Subjt:  VIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS

Q55DY8 Mitoferrin4.3e-0544.44Show/hide
Query:  GSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIK
        G + D ++TI  ++G  G +RG  PRM+FH+ ++AI WS YE  K
Subjt:  GSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIK

Q6DFK2 Solute carrier family 25 member 405.1e-0645.45Show/hide
Query:  KSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS
        +S S   ++  I+ ++G+GGL  G VPR++   PA AI  STYE  KSFF+ LN+
Subjt:  KSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS

Q6P316 Solute carrier family 25 member 402.3e-0645.45Show/hide
Query:  KSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS
        +S S   ++R I+ ++G+GGL  G +PR++   PA AI  STYE  KSFF+ LN+
Subjt:  KSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNS

Q8TBP6 Solute carrier family 25 member 407.4e-0544.68Show/hide
Query:  VIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLN
        +++ I+ K+G+ GL  G +PR++   PA AI  STYE  K+FFQ  N
Subjt:  VIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLN

Arabidopsis top hitse value%identityAlignment
AT1G07030.1 Mitochondrial substrate carrier family protein9.2e-2775.76Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSS
        GVCGCDRF S SI  V+RTI+KKDGY GL+RGW+PRMLFH PAAAICWSTYE +KSFFQD N  S+
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSS

AT2G30160.1 Mitochondrial substrate carrier family protein4.9e-2878.79Show/hide
Query:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSS
        GVCGCDRFKS SI DV RTI+KKDGY GL RGW+PRMLFH PAAAICWSTYE +KSFFQDLN  ++
Subjt:  GVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSS

AT3G55640.1 Mitochondrial substrate carrier family protein9.0e-0636.84Show/hide
Query:  FKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSS
        +K+G +G  ++ I++ +G  GL RG +P      P   IC+ TYE +K +F+DL+S+
Subjt:  FKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSS

AT5G14040.1 phosphate transporter 3;18.4e-0435.71Show/hide
Query:  DRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDL
        D  K  SI      +LK+ G  G  RGWVP +L ++   A  +  YE  K  + DL
Subjt:  DRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAGATAAACGTGCTTTTAGAGCTAGATAAAGGTCATATTTGGGGTGTATGTGGATGCGATAGATTCAAAAGTGGGTCGATTGGGGACGTGATTCGAACAATACT
GAAGAAGGATGGATATGGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTGTTCCATACGCCCGCTGCAGCCATTTGCTGGTCGACATACGAAGCAATAAAATCGTTCT
TCCAAGACCTCAACAGCAGCAGCAGCGACAATGTAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAGATAAACGTGCTTTTAGAGCTAGATAAAGGTCATATTTGGGGTGTATGTGGATGCGATAGATTCAAAAGTGGGTCGATTGGGGACGTGATTCGAACAATACT
GAAGAAGGATGGATATGGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTGTTCCATACGCCCGCTGCAGCCATTTGCTGGTCGACATACGAAGCAATAAAATCGTTCT
TCCAAGACCTCAACAGCAGCAGCAGCGACAATGTAACCTGAAAAGATAAGCAGCAGAGCAGAGTAGAGAGGAGAGGGGAACGAATACTTTTATTTATTTTTTTACGTTGT
CCCTTACAAAGAGCTTCTCTGTTTTGAGCTGCAGAGAGGCTTGCAGGAGAGGAGGGGAGTGTCTCAAAAGGCGAATGGGGCAGCAGTTCTAGGCAAAGGATCTCCAGATT
TGGTACAATTTGTATTCCACTCATTGGTGATGGTTCTAATAATGCCATATACAAAAGTTTTGATCCATTTCTTTCTTTGTTTTTTGATGGCTGTTGTTCTGGCATTAAGA
CCCACCCTGTTTTGTTTGTTTACCATCATTTATATAAGATTCTGGGTTCATGATCATCATGCTTGAAACTAACATGATGTTTACATAGGATCAAATGACTTCTCGAACAT
CGAGTTAGATTATGTTACAAAC
Protein sequenceShow/hide protein sequence
MSEINVLLELDKGHIWGVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT