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Carg23890 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23890
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHexosyltransferase
Genome locationCarg_Chr06:7350882..7357474
RNA-Seq ExpressionCarg23890
SyntenyCarg23890
Gene Ontology termsGO:0045489 - pectin biosynthetic process (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0047262 - polygalacturonate 4-alpha-galacturonosyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597181.1 Polygalacturonate 4-alpha-galacturonosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6397.76Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG + R
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
KAG7028646.1 hypothetical protein SDJN02_09827 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-73100Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRKSIGGDGNGSAG
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRKSIGGDGNGSAG
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRKSIGGDGNGSAG
XP_022943905.1 polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1 [Cucurbita moschata]5.0e-6295.52Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG ++R
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
XP_022943913.1 polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X2 [Cucurbita moschata]6.5e-6293.53Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG   RR +R+
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
XP_023539893.1 polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1 [Cucurbita pepo subsp. pepo]8.5e-6295.52Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHEDDGVNGGAGR RFFLALL+LLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG ++R
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
TrEMBL top hitse value%identityAlignment
A0A6J1FT09 Hexosyltransferase9.1e-6292.81Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
        AAVVAISLPSQTAVAPRSGTHQMEGNYSL  + RR +R+
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
A0A6J1FUD6 Hexosyltransferase1.6e-6192.81Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
        AAVVAISLPSQTAVAPRSGTHQMEGNYSL    RR +R+
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
A0A6J1FXH6 Hexosyltransferase3.1e-6293.53Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG   RR +R+
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKRRAIRK
A0A6J1FYC9 Hexosyltransferase2.4e-6295.52Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHED+GVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTW LVGVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
        AAVVAISLPSQTAVAPRSGTHQMEGNYSLG ++R
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
A0A6J1ID52 Hexosyltransferase2.5e-5992.54Show/hide
Query:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD
        MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLS  APLLFVVV+GFCTTGEGVAS+SPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNL GVD
Subjt:  MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVD

Query:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
        AAVVAIS PSQTAV+PRSGTHQMEGNYSLG ++R
Subjt:  AAVVAISLPSQTAVAPRSGTHQMEGNYSLGDSKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGAATAAAGGATCGGTTTCTGATTTGGCTAAGCACGAGGATGACGGAGTTAATGGCGGTGCTGGAAGATATAGGTTCTTTTTGGCTCTTCTCGTCCTCCTCTC
CGCTCTTGCGCCCTTGCTTTTTGTAGTCGTCAGCGGCTTCTGTACTACTGGTGAAGGGGTTGCTTCAAGTAGTCCAAGCAAAGGGGTTCTTGATGATATTGCAGCCCGCA
CAAACAACACGGGAACTATTAATATCAAGTCCAAAGAGAAAAATAATTTGATCCTAACATGGAATTTGGTTGGGGTGGACGCCGCAGTTGTTGCGATTTCCTTACCAAGC
CAAACGGCTGTAGCTCCGAGAAGTGGAACCCACCAGATGGAAGGCAACTACTCTCTGGGTGATAGTAAGAGAAGAGCAATACGAAAATCAATTGGTGGAGATGGAAATGG
TTCAGCAGGATGA
mRNA sequenceShow/hide mRNA sequence
AAAAACGGGAGTATAAAAAGCACCGGCGTTCAGTTTCTGGTCGCACTTCACAGAGATGTTATTCGATAGCGACGAAACTTAACTGAAAGATTCCCTTCTGTTACGTTCGC
TCTCTCTCTTTAACCTGTTTGCGCGACGAAATTCTCCTACCATTCAACTGCAATGCTCTTGGATTTTTGATTCTTGGCGTTAATTCTCTCCGTTTTTTTGTTCATCGTCA
ATGGCGCTGAATAAAGGATCGGTTTCTGATTTGGCTAAGCACGAGGATGACGGAGTTAATGGCGGTGCTGGAAGATATAGGTTCTTTTTGGCTCTTCTCGTCCTCCTCTC
CGCTCTTGCGCCCTTGCTTTTTGTAGTCGTCAGCGGCTTCTGTACTACTGGTGAAGGGGTTGCTTCAAGTAGTCCAAGCAAAGGGGTTCTTGATGATATTGCAGCCCGCA
CAAACAACACGGGAACTATTAATATCAAGTCCAAAGAGAAAAATAATTTGATCCTAACATGGAATTTGGTTGGGGTGGACGCCGCAGTTGTTGCGATTTCCTTACCAAGC
CAAACGGCTGTAGCTCCGAGAAGTGGAACCCACCAGATGGAAGGCAACTACTCTCTGGGTGATAGTAAGAGAAGAGCAATACGAAAATCAATTGGTGGAGATGGAAATGG
TTCAGCAGGATGATGATACCATTGTAAAACTTGAGAATGCTAATATGCAAGCCTCTGAATTAGTTAACTCCTCGATTCTTGAAAAATACAGTACATGGAAGAAAGAAAAT
GGGAACAAGAACCGAGTTTCAACCATACGTCTAATGCGAGACCAGATTATTATGGCAAGAATATATTTGAGTGTATCGAAAAAGAAAATGAAACAGGGGTTGCGTCAACA
GCTCTTAGTTTGTCTCAAAAGGAGTCGTCGTGCCCTAGGAGAGGCAAATGTTGATGCTGAGCTGCATTCCAGTGCGCGCAAGAGAATAAAAGAAATGGCTGCTGTTCTTT
CCAAGGCGAGAGATGAACTGTTTGATTGCGAGTTCGTGACCAGGAAATTGAGAGCAATGCTTCTAACTGAAGAGGAAAAGATTAGAAGGTTGAAAAGGCAAAATACATTT
CTCACTCAATTGGGAGTTAAGGGTATTCCAGGTGGTATTCGCTGCCTGTCCTTGCGCCTTACCGTTGATTACTACCTTCTGCCTCCGGAGAAGAGAGAGCTCCCAAAAAG
TGAAAACTTGGAAAATCCAAAACTTCACCATTATGCGCTCTTTACAGACAACGTGTTGGCTGCAGCAGTCGTTGTGAACTCAACCGTAATGAATGCTAAGGATTCCTCAA
AACATGTATTCCACCTAGTTACTGATGATCTCAACTATGGAGCAATGAAAATGTGGTTTCTCTTAAATCCTCCAGAAGAAGCCACGATCCACGTTGAAAATTTAGATGAA
CTAAAGTGGCTGAACTCATCCTACTGCCCAGTACTCCGCCAGCTCAAATCTGCAGCAATGAGAGAATATTATTTCAAGGCAGGACGTTCAACCACTGGTTCATCTAGTGC
TTCTAGTTTGAAGTACAGGAACCCAAAATATCTCTCAATGCTCAATCATCTAAGGTTCTATCTACCTCAAATTTATCCCAAGTTGGATAAGATTTTATTTCTGGACGATG
ACATTGTTGTCCAGAAAGATTTGACTGGGTTGTGGCTCGTAGACCTGGAGAGAAAAGTCAACGGTGCCGTGGAAACCTGTGTTGACAATTTCCATCGTTTTGACAAGTAC
CTTAACTTCTCAAACCCTCATATCGCTAGGGAATTCGATCCGAATGCTTGCGGTTGGGCTTATGGAATGAATATATTTGATCTCAAGGAGTGGAAGAAGAAAGATCTCAC
TGGCTTATATCACATCTGGCAGAACTTGAATGAAGAAAGGCTGCTTTGGAAGCTGGGAACATTACCTCCAGGTTTGATGACATTTTACGGGCTGACATATTCCCTGGAGA
AGTATTGGCATGTGCTTGGTTTGGGTTACAACCCAAATATCAACCCATCGGACATAGAAAATGCAGCTGTTATTCACTATAATGGCAACAGGAAGCCATGGATGGAGATG
GCCATTACGAAGTATCGCCCATACTGGACAAAGTACATTGACTACGACCATCCTTATCTTAGCCACTGCCACTTCATAAAATGAAACTAAGAATTGAATGTGGGTACTAA
TCCCCTCTCAACCCACAAAAATAGCCTTTAAAGCAAAACTCCTTCCTGGCAGTAACCAGAGCTTCAGAAAGAACCTGGAGAATCCGTAAATATTAGC
Protein sequenceShow/hide protein sequence
MALNKGSVSDLAKHEDDGVNGGAGRYRFFLALLVLLSALAPLLFVVVSGFCTTGEGVASSSPSKGVLDDIAARTNNTGTINIKSKEKNNLILTWNLVGVDAAVVAISLPS
QTAVAPRSGTHQMEGNYSLGDSKRRAIRKSIGGDGNGSAG