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Carg23936 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23936
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionENTH domain-containing protein
Genome locationCarg_Chr05:4162210..4162989
RNA-Seq ExpressionCarg23936
SyntenyCarg23936
Gene Ontology termsGO:0006900 - vesicle budding from membrane (biological process)
GO:0048268 - clathrin coat assembly (biological process)
GO:0072583 - clathrin-dependent endocytosis (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0005905 - clathrin-coated pit (cellular component)
GO:0030136 - clathrin-coated vesicle (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005545 - 1-phosphatidylinositol binding (molecular function)
GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding (molecular function)
GO:0032050 - clathrin heavy chain binding (molecular function)
InterPro domainsIPR008942 - ENTH/VHS
IPR011417 - AP180 N-terminal homology (ANTH) domain
IPR013809 - ENTH domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598894.1 putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. sororia]2.8e-40100Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

KAG7029846.1 putative clathrin assembly protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-52100Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWIGCVWHYCNERQDTR
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWIGCVWHYCNERQDTR
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWIGCVWHYCNERQDTR

Query:  DRI
        DRI
Subjt:  DRI

XP_022929699.1 putative clathrin assembly protein At5g57200 [Cucurbita moschata]1.4e-3998.84Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSAT VMRPRADVAYCIHALAKRLSKTRSWI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

XP_022997560.1 putative clathrin assembly protein At5g57200 [Cucurbita maxima]1.1e-3998.82Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERH+RKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

XP_023546860.1 putative clathrin assembly protein At5g57200 [Cucurbita pepo subsp. pepo]3.7e-4098.84Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERH+RKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

TrEMBL top hitse value%identityAlignment
A0A0A0LJC3 ENTH domain-containing protein3.3e-3995.35Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSE+KDLDIAIVKATNHVECPPKERH+RKIFSATSV+RPRADVAYCIHALAKRLSKTR+WI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

A0A2P5DLJ2 AP180 N-terminal domain containing protein3.3e-3995.35Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSE+KDLDIAIVKATNHVECPPKERH+RKIFSATSV+RPRADVAYCIHALAKRLSKTR+WI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

A0A5D3BVQ9 Putative clathrin assembly protein3.3e-3995.35Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSE+KDLDIAIVKATNHVECPPKERH+RKIFSATSV+RPRADVAYCIHALAKRLSKTR+WI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

A0A6J1EPI8 putative clathrin assembly protein At5g572006.7e-4098.84Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSAT VMRPRADVAYCIHALAKRLSKTRSWI
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

A0A6J1KA09 putative clathrin assembly protein At5g572005.2e-4098.82Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERH+RKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

SwissProt top hitse value%identityAlignment
P94017 Putative clathrin assembly protein At1g149101.8e-3477.65Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGT QS+R+AYGALKD+TKVGL +VNS+Y +LD+AIVKATNHVECPPK+RH+RKIF ATS +RPRADVAYCIHAL++RL KTR+W
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

Q8LBH2 Putative clathrin assembly protein At2g016001.3e-3582.35Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGT QS+RKAYGALKDSTKVGL +VNSEY DLD+AIVKATNHVECPPK+RH+RKIF+ATSV R RADVAYCIHAL++RL KTR+W
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

Q8VYT2 Putative clathrin assembly protein At4g259401.1e-3481.4Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        M TF SFRKA GA+KDST V +AKVNSE+KDLD+AIVKATNHVE  PKERHIR+IFSATSV++PRADVAYCIHALAKRLSKTR+W+
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

Q9LHS0 Putative clathrin assembly protein At5g352008.2e-2770.24Show/hide
Query:  GTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        G+  S R+  GA+KD+T V LAKVNS+YK+LDIAIVKATNHVE P KER+IR IF A S  RPRADVAYCIHALA+RLS+T +W
Subjt:  GTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

Q9LVD8 Putative clathrin assembly protein At5g572006.1e-3887.21Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTF SFRKAYGALKD+T VGLAKVNSE+KDLDIAIVKATNHVE PPKERH+RKIFSATSV++PRADVAYCIHAL+KRLSKTR+W+
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

Arabidopsis top hitse value%identityAlignment
AT1G14910.1 ENTH/ANTH/VHS superfamily protein1.3e-3577.65Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGT QS+R+AYGALKD+TKVGL +VNS+Y +LD+AIVKATNHVECPPK+RH+RKIF ATS +RPRADVAYCIHAL++RL KTR+W
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

AT2G01600.1 ENTH/ANTH/VHS superfamily protein9.0e-3782.35Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        MGT QS+RKAYGALKDSTKVGL +VNSEY DLD+AIVKATNHVECPPK+RH+RKIF+ATSV R RADVAYCIHAL++RL KTR+W
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

AT4G25940.1 ENTH/ANTH/VHS superfamily protein7.6e-3681.4Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        M TF SFRKA GA+KDST V +AKVNSE+KDLD+AIVKATNHVE  PKERHIR+IFSATSV++PRADVAYCIHALAKRLSKTR+W+
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI

AT5G35200.1 ENTH/ANTH/VHS superfamily protein5.9e-2870.24Show/hide
Query:  GTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW
        G+  S R+  GA+KD+T V LAKVNS+YK+LDIAIVKATNHVE P KER+IR IF A S  RPRADVAYCIHALA+RLS+T +W
Subjt:  GTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSW

AT5G57200.1 ENTH/ANTH/VHS superfamily protein4.3e-3987.21Show/hide
Query:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI
        MGTF SFRKAYGALKD+T VGLAKVNSE+KDLDIAIVKATNHVE PPKERH+RKIFSATSV++PRADVAYCIHAL+KRLSKTR+W+
Subjt:  MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACATTTCAGAGCTTCCGCAAAGCTTATGGCGCTCTCAAGGATTCTACCAAGGTCGGCCTCGCCAAGGTCAACAGCGAATACAAGGATTTGGATATCGCCATTGT
CAAGGCTACCAATCACGTTGAATGTCCGCCTAAAGAACGTCATATTCGAAAAATATTTTCGGCGACATCGGTGATGAGGCCTCGGGCGGATGTGGCGTACTGCATTCATG
CATTGGCGAAGAGATTGTCGAAGACGCGGAGTTGGATCGGTTGTGTTTGGCACTATTGTAATGAGAGACAGGACACTAGAGATCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
TCGTCATCGTCGTCGTCTTGGTTGTTATGGAAGACTCGATGACGGAGGAGAAAAGATGATCACCATTTCCTTTCTCTCTCTCTCTCTCTCTCTCTGATCAATCATCAAGC
GGATTCTGATTTCCATGGGCACATTTCAGAGCTTCCGCAAAGCTTATGGCGCTCTCAAGGATTCTACCAAGGTCGGCCTCGCCAAGGTCAACAGCGAATACAAGGATTTG
GATATCGCCATTGTCAAGGCTACCAATCACGTTGAATGTCCGCCTAAAGAACGTCATATTCGAAAAATATTTTCGGCGACATCGGTGATGAGGCCTCGGGCGGATGTGGC
GTACTGCATTCATGCATTGGCGAAGAGATTGTCGAAGACGCGGAGTTGGATCGGTTGTGTTTGGCACTATTGTAATGAGAGACAGGACACTAGAGATCGAATTTGA
Protein sequenceShow/hide protein sequence
MGTFQSFRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATNHVECPPKERHIRKIFSATSVMRPRADVAYCIHALAKRLSKTRSWIGCVWHYCNERQDTRDRI