; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23948 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23948
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:3957616..3958969
RNA-Seq ExpressionCarg23948
SyntenyCarg23948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585754.1 hypothetical protein SDJN03_18487, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3274.76Show/hide
Query:  MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV
        MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGR                          GIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV
Subjt:  MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV

Query:  HSL
        HSL
Subjt:  HSL
KAG7020665.1 hypothetical protein SDJN02_17351, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-58100Show/hide
Query:  MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV
        MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV
Subjt:  MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIV

Query:  HSLQSISTPISCSS
        HSLQSISTPISCSS
Subjt:  HSLQSISTPISCSS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTATGGAGTTCTTTGTTTGGACGTGGAAGAAGCTGAAGGATCAATACTGTGACGAAACTCGTCTCTTCGAGATCTTATCGATGCTAGGAAGAGGTATGATCCT
TATCGATCTTTGCGACCAGGTTGAGAATTATAGCTTATCCTATCAACACCTGATACTCATTACTCCAGGAATAAAGCAGCTGACTCCTCAAGTTAACTTGGATTACATCA
TTCCAGGATTAAACAAAAAACAGCATTGTAAATTTGTAGCAGTGTTTCTTTATTGTCGAGTCATGGAGATCGACATAGTCCATTCACTTCAATCCATTTCAACTCCCATT
TCTTGTTCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTATGGAGTTCTTTGTTTGGACGTGGAAGAAGCTGAAGGATCAATACTGTGACGAAACTCGTCTCTTCGAGATCTTATCGATGCTAGGAAGAGGTATGATCCT
TATCGATCTTTGCGACCAGGTTGAGAATTATAGCTTATCCTATCAACACCTGATACTCATTACTCCAGGAATAAAGCAGCTGACTCCTCAAGTTAACTTGGATTACATCA
TTCCAGGATTAAACAAAAAACAGCATTGTAAATTTGTAGCAGTGTTTCTTTATTGTCGAGTCATGGAGATCGACATAGTCCATTCACTTCAATCCATTTCAACTCCCATT
TCTTGTTCATCTTAA
Protein sequenceShow/hide protein sequence
MKLMEFFVWTWKKLKDQYCDETRLFEILSMLGRGMILIDLCDQVENYSLSYQHLILITPGIKQLTPQVNLDYIIPGLNKKQHCKFVAVFLYCRVMEIDIVHSLQSISTPI
SCSS